RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 LACC1Q8IV20 430 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 CDH7Q9ULB5 785 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 ANKRD12Q6UB98 2062 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 A0A1B0GVI7 797 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 JUNBP17275 347 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-202ENST00000409031 WEE1P30291 646 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 DGKEP52429 567 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 CLEC12AQ5QGZ9 265 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 HFE2Q6ZVN8 426 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 TAS1R3Q7RTX0 852 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 MZB1Q8WU39 189 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 CACNG6Q9BXT2 260 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 EVLQ9UI08 416 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-202ENST00000409031 ICMTO60725 284 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 SEC14L2O76054 403 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 NUDT14O95848 222 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 CKBP12277 381 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 CRISP1P54107 249 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 TAS2R43P59537 309 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 BCL7AQ4VC05 210 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 ATAT1Q5SQI0 421 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 STOML3Q8TAV4 291 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 TBX5Q99593 518 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 PCDHB16Q9NRJ7 776 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 KCTD3Q9Y597 815 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 APOC1P02654 83 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 HTR1BP28222 390 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 PGGT1BP53609 377 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 MLLT6P55198 1093 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-202ENST00000409031 SNTB2Q13425 540 aaKnown RBP17.12■□□□□ 0.33
SMPD4-202ENST00000409031 SPERTQ8NA61 448 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 FEVQ99581 238 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 AIFM2Q9BRQ8 373 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 TRPV4Q9HBA0 871 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 CTPS2Q9NRF8 586 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 CDH10Q9Y6N8 788 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 EEF1E1O43324 174 aaKnown RBP17.12■□□□□ 0.33
SMPD4-202ENST00000409031 PCDH8O95206 1070 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 LDOC1O95751 146 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-202ENST00000409031 NPR2P20594 1047 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 EIF2DP41214 584 aaKnown RBP17.12■□□□□ 0.33
SMPD4-202ENST00000409031 KHKP50053 298 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 RBBP4Q09028 425 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 TSPAN33Q86UF1 283 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 C1orf52Q8N6N3 182 aaKnown RBP17.12■□□□□ 0.33
SMPD4-202ENST00000409031 SLC9A6Q92581 669 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 ARL6Q9H0F7 186 aa17.12■□□□□ 0.33
SMPD4-202ENST00000409031 TEX46H3BTG2 121 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 PCDH17O14917 1159 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 S100A2P29034 98 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 GALEQ14376 348 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 SLC25A25Q6KCM7 469 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 LARP4Q71RC2 724 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMPD4-202ENST00000409031 TSEN15Q8WW01 171 aaKnown RBP17.11■□□□□ 0.33
SMPD4-202ENST00000409031 NXPE2Q96DL1 559 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 ZNF778Q96MU6 729 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 URADA6NGE7 173 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 S1PR4O95977 384 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 GDF5P43026 501 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 MAD2L1BPQ15013 274 aaPredicted RBP17.11■□□□□ 0.33
SMPD4-202ENST00000409031 PAGE3Q5JUK9 113 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 CDKL4Q5MAI5 379 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 PYCR2Q96C36 320 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 COQ10AQ96MF6 247 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 MTG2Q9H4K7 406 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 N6AMT1Q9Y5N5 214 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 PAHP00439 452 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 CFL1P23528 166 aaKnown RBP17.11■□□□□ 0.33
SMPD4-202ENST00000409031 HTR2AP28223 471 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 RAET1GQ6H3X3 334 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 QSOX2Q6ZRP7 698 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 ISCA2Q86U28 154 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 GTF2H4Q92759 462 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 CD244Q9BZW8 370 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 COMMD4Q9H0A8 199 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 ACOT13Q9NPJ3 140 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 AKAP12Q02952 1782 aa17.11■□□□□ 0.33
SMPD4-202ENST00000409031 COL1A1P02452 1464 aaPredicted RBP17.1■□□□□ 0.33
SMPD4-202ENST00000409031 FNTBP49356 437 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 RAB5BP61020 215 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 TAF13Q15543 124 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.1■□□□□ 0.33
SMPD4-202ENST00000409031 FAM198BQ6UWH4 519 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 RGL4Q8IZJ4 473 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 FTMTQ8N4E7 242 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 PCSK9Q8NBP7 692 aaKnown RBP17.1■□□□□ 0.33
SMPD4-202ENST00000409031 EFCAB11Q9BUY7 163 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 SIAEQ9HAT2 523 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 P2RX2Q9UBL9 471 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 TLR6Q9Y2C9 796 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 TMEM151AQ8N4L1 468 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 OR5J2Q8NH18 312 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 ARNTL2Q8WYA1 636 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 CST11Q9H112 138 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 RHBGQ9H310 441 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 ZNF639Q9UID6 485 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.1■□□□□ 0.33
SMPD4-202ENST00000409031 C5orf51A6NDU8 294 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 RCAN2Q14206 197 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 GINS1Q14691 196 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms