RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 TRBV2A0A0J9YWF9 115 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 LOC101059948A0A1B0GTJ6 334 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 PLSCR5A0PG75 271 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 SLC9B1P1A6NJY1 282 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 C17orf105B2RV13 164 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 APOHP02749 345 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 SERPING1P05155 500 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 IGKV2-30P06310 120 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 NGFRP08138 427 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 SP9P0CG40 484 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 KRT3P12035 628 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 GAP43P17677 238 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 SERPINB6P35237 376 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 CDH11P55287 796 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 BPIFB3P59826 476 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 SLC34A1Q06495 639 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 RASGEF1BQ0VAM2 473 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 WASHC5Q12768 1159 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 SPDYCQ5MJ68 293 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 STXBP5Q5T5C0 1151 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 SUSD4Q5VX71 490 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 KCTD11Q693B1 232 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 ZNF852Q6ZMS4 543 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 PRSS42Q7Z5A4 293 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 CCDC60Q8IWA6 550 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 AQP12AQ8IXF9 295 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 NAGSQ8N159 534 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 GRHL3Q8TE85 626 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 SLC47A1Q96FL8 570 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 ZNF583Q96ND8 569 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 LAT2Q9GZY6 243 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 C1orf21Q9H246 121 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 CUEDC2Q9H467 287 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 TLE6Q9H808 572 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 C10orf88Q9H8K7 445 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 EVA1AQ9H8M9 152 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 DNAJC11Q9NVH1 559 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 FAM118AQ9NWS6 357 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 MIS18AQ9NYP9 233 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 PTTG2Q9NZH5 202 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 C19orf25Q9UFG5 118 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 NOCTQ9UK39 431 aaKnown RBP4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 C3P01024 1663 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 PFASO15067 1338 aa4.37□□□□□ -1.71
HMGB3P18-201ENST00000406327 TRAV18A0A075B6X5 111 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 DENND3A2RUS2 1198 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 CAPN9O14815 690 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 BCAS2O75934 225 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 ZBTB11O95625 1053 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 NR3C1P04150 777 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 T-ENOLP0DO92 83 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 CETPP11597 493 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 GP1BBP13224 206 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 FERP16591 822 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 MSH3P20585 1137 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 CA4P22748 312 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 STARD6P59095 220 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 TSTA3Q13630 321 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 OPCMLQ14982 345 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 UGP2Q16851 508 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 ACCSLQ4AC99 568 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 PHLDA2Q53GA4 152 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 PRAMEF8Q5VWM4 474 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 TTC27Q6P3X3 843 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 PRSS55Q6UWB4 352 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 SLC9B2Q86UD5 537 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 ZNF410Q86VK4 478 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 APCDD1Q8J025 514 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 DNAJC22Q8N4W6 341 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 OR13C3Q8NGS6 347 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 NAF1Q96HR8 494 aaKnown RBP4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 ZNF479Q96JC4 524 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 TMEM237Q96Q45 408 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 RASL10BQ96S79 203 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 PKP4Q99569 1192 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 MEIS3Q99687 375 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 PITPNM3Q9BZ71 974 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 TRIM7Q9C029 511 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 FAM49AQ9H0Q0 323 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 DCTPP1Q9H773 170 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 MAGEF1Q9HAY2 307 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 A4GALTQ9NPC4 353 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 SDR39U1Q9NRG7 319 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 FLRT3Q9NZU0 649 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 EPS15L1Q9UBC2 864 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 KIF20BQ96Q89 1820 aa4.36□□□□□ -1.71
HMGB3P18-201ENST00000406327 MON2Q7Z3U7 1717 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 EVPLQ92817 2033 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 KRT87PA6NCN2 255 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 C2CD4DB7Z1M9 353 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 PRSS46E5RG02 174 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 C16orf97H3BN30 126 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 VEGFDO43915 354 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 PRKNO60260 465 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 HSF2BPO75031 334 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 B3GALNT1O75752 331 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 CAVIN2O95810 425 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 IGHV4-31P0DP07 118 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 CPA3P15088 417 aa4.35□□□□□ -1.71
HMGB3P18-201ENST00000406327 SSTR1P30872 391 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms