RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 LAMP1P11279 417 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 HOXB3P14651 431 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-205ENST00000401607 CDKN2CP42773 168 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 RACK1P63244 317 aaKnown RBP24.52■■□□□ 1.52
CPNE1-205ENST00000401607 PLCL1Q15111 1095 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 RUNDC3AQ59EK9 446 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 CYP2R1Q6VVX0 501 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 LRRC74BQ6ZQY2 392 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 IFNEQ86WN2 208 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 DHFR2Q86XF0 187 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 SLC37A2Q8TED4 501 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 C16orf78Q8WTQ4 265 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 ZFPM2Q8WW38 1151 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 NELL1Q92832 810 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 SPACA7Q96KW9 195 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 KCTD14Q9BQ13 255 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-205ENST00000401607 IKZF5Q9H5V7 419 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-205ENST00000401607 EGFL7Q9UHF1 273 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 USP22Q9UPT9 525 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 KLHL20Q9Y2M5 609 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 PCDHB14Q9Y5E9 798 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 ARHGEF17Q96PE2 2063 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-205ENST00000401607 EML5Q05BV3 1969 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 KIR2DS5A0A0G2JLQ3 304 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 A0A0G2JNG1 304 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 OR5K4A6NMS3 321 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 KIR2DS3K7RE56 304 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 YY2O15391 372 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 CLEC3AO75596 197 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 TPP2P29144 1249 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-205ENST00000401607 HPCAL1P37235 193 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 HNRNPFP52597 415 aaKnown RBP24.52■■□□□ 1.52
CPNE1-205ENST00000401607 DMWDQ09019 674 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 KIR2DS5Q14953 304 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 IQCHQ86VS3 1027 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 PTRH1Q86Y79 214 aaKnown RBP24.52■■□□□ 1.52
CPNE1-205ENST00000401607 MIEF2Q96C03 454 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 SARGQ9BW04 601 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 TM9SF3Q9HD45 589 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 MYNNQ9NPC7 610 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 FAM120CQ9NX05 1096 aaKnown RBP24.52■■□□□ 1.52
CPNE1-205ENST00000401607 AHSPQ9NZD4 102 aa24.52■■□□□ 1.52
CPNE1-205ENST00000401607 RTCAO00442 366 aaKnown RBP24.51■■□□□ 1.51
CPNE1-205ENST00000401607 BSGP35613 385 aa24.51■■□□□ 1.51
CPNE1-205ENST00000401607 FXNQ16595 210 aa24.51■■□□□ 1.51
CPNE1-205ENST00000401607 TTLQ8NG68 377 aa24.51■■□□□ 1.51
CPNE1-205ENST00000401607 C1orf216Q8TAB5 229 aa24.51■■□□□ 1.51
CPNE1-205ENST00000401607 ZUFSPQ96AP4 578 aa24.51■■□□□ 1.51
CPNE1-205ENST00000401607 COQ8BQ96D53 544 aa24.51■■□□□ 1.51
CPNE1-205ENST00000401607 TACO1Q9BSH4 297 aaKnown RBP24.51■■□□□ 1.51
CPNE1-205ENST00000401607 DUSP26Q9BV47 211 aa24.51■■□□□ 1.51
CPNE1-205ENST00000401607 AICDAQ9GZX7 198 aa24.51■■□□□ 1.51
CPNE1-205ENST00000401607 MIR1-1HGQ9H1L0 117 aa24.51■■□□□ 1.51
CPNE1-205ENST00000401607 CD320Q9NPF0 282 aa24.51■■□□□ 1.51
CPNE1-205ENST00000401607 ATP6V1HQ9UI12 483 aa24.51■■□□□ 1.51
CPNE1-205ENST00000401607 TCRBV3S1A0A5B6 114 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 NDUFS4O43181 175 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 SNRNP200O75643 2136 aaKnown RBP24.5■■□□□ 1.51
CPNE1-205ENST00000401607 CSF2P04141 144 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 GSNP06396 782 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 HRH2P25021 359 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 GRK3P35626 688 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 CYP4F3Q08477 520 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 KIR2DS3Q14952 304 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 ZIC1Q15915 447 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 CPTPQ5TA50 214 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 FAM71E1Q6IPT2 247 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 LCN8Q6JVE9 175 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 ZFP1Q6P2D0 407 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 SLC36A4Q6YBV0 504 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 SLC22A18Q96BI1 424 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 RSRC1Q96IZ7 334 aaKnown RBP24.5■■□□□ 1.51
CPNE1-205ENST00000401607 REEP4Q9H6H4 257 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 SYNPO2LQ9H987 977 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 LHX9Q9NQ69 397 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 ACTR3BQ9P1U1 418 aa24.5■■□□□ 1.51
CPNE1-205ENST00000401607 TLR4O00206 839 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 RFXANKO14593 260 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 ARPC2O15144 300 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 NME1P15531 152 aaKnown RBP24.49■■□□□ 1.51
CPNE1-205ENST00000401607 HTR1EP28566 365 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 TAS2R50P59544 299 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 RHDQ02161 417 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 PDE7AQ13946 482 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 DUOXA1Q1HG43 343 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 ZNF385BQ569K4 471 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 UBE3DQ7Z6J8 389 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 PAQR7Q86WK9 346 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 TMEM132CQ8N3T6 1108 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 OR2A14Q96R47 310 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 CPPED1Q9BRF8 314 aaPredicted RBP24.49■■□□□ 1.51
CPNE1-205ENST00000401607 MUC13Q9H3R2 512 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 PIF1Q9H611 641 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 DLGAP2Q9P1A6 1054 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 SNX7Q9UNH6 387 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 ERVK-11Q9UQG0 969 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 CROCCQ5TZA2 2017 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 FURINP09958 794 aa24.49■■□□□ 1.51
CPNE1-205ENST00000401607 GRIA3P42263 894 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms