RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ZNF182P17025 639 aaPredicted RBP15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 SDC1P18827 310 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 ITIH1P19827 911 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 HIST1H2ADP20671 130 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 SLC6A12P48065 614 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 ISL1P61371 349 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 XKR5Q6UX68 686 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 TMEM179BQ7Z7N9 219 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 ZNF554Q86TJ5 538 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 DCP2Q8IU60 420 aaKnown RBP15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 C1orf210Q8IVY1 113 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 FBLIM1Q8WUP2 373 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 NELL1Q92832 810 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 ZNF566Q969W8 418 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 HIST1H2AHQ96KK5 128 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 HIST1H2AJQ99878 128 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 H2AFJQ9BTM1 129 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 BTBD1Q9H0C5 482 aa15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 TMEFF2Q9UIK5 374 aaPredicted RBP15.35■□□□□ 0.05
CHRFAM7A-203ENST00000401522 SLC1A7O00341 560 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 BCKDKO14874 412 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 CBFA2T3O75081 653 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 ELFN1P0C7U0 828 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 ACSL1P33121 698 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 TRPC1P48995 793 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 PXNP49023 591 aaPredicted RBP15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 B4GALNT1Q00973 533 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 PGS1Q32NB8 556 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 SERPINA11Q86U17 422 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 FAM124AQ86V42 546 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 SETD9Q8NE22 299 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 DDHD1Q8NEL9 900 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 ASB11Q8WXH4 323 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 PLEKHA8Q96JA3 519 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 TSSK3Q96PN8 268 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 WRAP53Q9BUR4 548 aaKnown RBP15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 COL25A1Q9BXS0 654 aaPredicted RBP15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 TPSD1Q9BZJ3 242 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 RAD21L1Q9H4I0 556 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 DNAAF2Q9NVR5 837 aaKnown RBP15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 PPT2Q9UMR5 302 aa15.34■□□□□ 0.05
CHRFAM7A-203ENST00000401522 EVPLLA8MZ36 301 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 C10orf142B7Z368 130 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 RFXANKO14593 260 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 MAGEB3O15480 346 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 LAMTOR5O43504 91 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 FOXD2O60548 495 aaPredicted RBP15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 PRMT3O60678 531 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 MMP20O60882 483 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 UGT2B11O75310 529 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 CLPXO76031 633 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 PCDH8O95206 1070 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 C1SP09871 688 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 MYCLP1P12525 358 aaPredicted RBP15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 TDGF1P13385 188 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 ABRQ12979 859 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 DPY19L1Q2PZI1 675 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 ATP13A5Q4VNC0 1218 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 LAIR2Q6ISS4 152 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 DET1Q7L5Y6 550 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 HSD11B1LQ7Z5J1 315 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 EGFL6Q8IUX8 553 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 ZDHHC21Q8IVQ6 265 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 MAML2Q8IZL2 1156 aaPredicted RBP15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 DTWD2Q8NBA8 298 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 CXorf40AQ8TE69 158 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 GIPC3Q8TF64 312 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 SGCDQ92629 289 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 FCRL1Q96LA6 429 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 COQ10AQ96MF6 247 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 NODALQ96S42 347 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 TRIT1Q9H3H1 467 aaKnown RBP15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 DNAJC11Q9NVH1 559 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 WSB2Q9NYS7 404 aaPredicted RBP15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 BAG5Q9UL15 447 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 CYP8B1Q9UNU6 501 aa15.33■□□□□ 0.05
CHRFAM7A-203ENST00000401522 TBC1D3DA0A087WVF3 549 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 TBC1D3IA0A087WXS9 549 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 TBC1D3EA0A087X179 549 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 TBC1D3KA0A087X1G2 549 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 TBC1D3FA6NER0 549 aaPredicted RBP15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 TBC1D3LB9A6J9 549 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 AXIN1O15169 862 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 GSNP06396 782 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 TBC1D3HP0C7X1 549 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CYP2A7P20853 494 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PRPS1L1P21108 318 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PRKACGP22612 351 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 IGFBP5P24593 272 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CD6P30203 668 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 AVPR2P30518 371 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 KIR3DL1P43629 444 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 SPINT3P49223 89 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 NEK2P51955 445 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 MAPK10P53779 464 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 RPS21P63220 83 aaKnown RBP15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ZNF33BQ06732 778 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 PLEKHS1Q5SXH7 462 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 CPZQ66K79 652 aa15.33■□□□□ 0.04
CHRFAM7A-203ENST00000401522 ANKRD34AQ69YU3 496 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms