RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ASCL3Q9NQ33 180 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 MRPS2Q9Y399 296 aaKnown RBP15.19■□□□□ 0.02
HMGA1-204ENST00000401473 PCDHGA3Q9Y5H0 932 aa15.19■□□□□ 0.02
HMGA1-204ENST00000401473 ANKRD11Q6UB99 2663 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-204ENST00000401473 LRIT2A6NDA9 550 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 CDRT15L2A8MXV6 281 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 BRINP1O60477 761 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 SH3BGRLO75368 114 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 SCRG1O75711 98 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 TGFB1P01137 390 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 PWP1Q13610 501 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 DDX39BQ13838 428 aaKnown RBP15.18■□□□□ 0.02
HMGA1-204ENST00000401473 UGT3A2Q3SY77 523 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 SGO1Q5FBB7 561 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 TBC1D19Q8N5T2 526 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 UBE2E3Q969T4 207 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 DDA1Q9BW61 102 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 ASPSCR1Q9BZE9 553 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 AKIRIN1Q9H9L7 192 aaPredicted RBP15.18■□□□□ 0.02
HMGA1-204ENST00000401473 IRAK4Q9NWZ3 460 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 DHCR7Q9UBM7 475 aaKnown RBP15.18■□□□□ 0.02
HMGA1-204ENST00000401473 TSC22D4Q9Y3Q8 395 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 TEX51A0A1B0GUA7 166 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 HYKKA2RU49 373 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 TMEM114B3SHH9 223 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 C4orf51C9J302 202 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 NVLO15381 856 aaKnown RBP15.18■□□□□ 0.02
HMGA1-204ENST00000401473 CLEC3AO75596 197 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 ETHE1O95571 254 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 PDYNP01213 254 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 SERPINA6P08185 405 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 HNRNPH1P31943 449 aaKnown RBP15.18■□□□□ 0.02
HMGA1-204ENST00000401473 HTR6P50406 440 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 ABRAXAS2Q15018 415 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 TTC19Q6DKK2 380 aaPredicted RBP15.18■□□□□ 0.02
HMGA1-204ENST00000401473 TMEM214Q6NUQ4 689 aaKnown RBP15.18■□□□□ 0.02
HMGA1-204ENST00000401473 TLDC1Q6P9B6 456 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 SCIMPQ6UWF3 145 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 TMEM126BQ8IUX1 230 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 ZNF781Q8N8C0 355 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 CAMKVQ8NCB2 501 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 TTLQ8NG68 377 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 CKAP2Q8WWK9 683 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 C10orf90Q96M02 699 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 SLC6A16Q9GZN6 736 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 EML4Q9HC35 981 aaKnown RBP15.18■□□□□ 0.02
HMGA1-204ENST00000401473 THAP1Q9NVV9 213 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 STK38LQ9Y2H1 464 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 TRAF6Q9Y4K3 522 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 DNAJC15Q9Y5T4 150 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 AK5Q9Y6K8 562 aa15.18■□□□□ 0.02
HMGA1-204ENST00000401473 URB1O60287 2271 aaKnown RBP15.17■□□□□ 0.02
HMGA1-204ENST00000401473 MANBAO00462 879 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 KLF11O14901 512 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 AZIN1O14977 448 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 DXOO77932 396 aaKnown RBP15.17■□□□□ 0.02
HMGA1-204ENST00000401473 HSPA4LO95757 839 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 B3GALT4O96024 378 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 ENO1P06733 434 aaKnown RBP15.17■□□□□ 0.02
HMGA1-204ENST00000401473 SLC35G6P0C7Q6 338 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 SLC5A2P31639 672 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 PIK3CBP42338 1070 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 RPS13P62277 151 aaKnown RBP15.17■□□□□ 0.02
HMGA1-204ENST00000401473 GRM7Q14831 915 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 SH2D4BQ5SQS7 431 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 MANEAQ5SRI9 462 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 IGF2-ASQ6U949 168 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 PRSS41Q7RTY9 318 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 SHISA5Q8N114 240 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 RAB3IL1Q8TBN0 382 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 NT5CQ8TCD5 201 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 DYDC1Q8WWB3 177 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 CCT6BQ92526 530 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 SEC16BQ96JE7 1060 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 F2RL3Q96RI0 385 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 ULBP3Q9BZM4 244 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 OR51B5Q9H339 312 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 TUBB1Q9H4B7 451 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 ELOVL6Q9H5J4 265 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 SLCO1B3Q9NPD5 702 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 DMRT3Q9NQL9 472 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 FAM53CQ9NYF3 392 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 SNX6Q9UNH7 406 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 FIS1Q9Y3D6 152 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 TMEM184BQ9Y519 407 aaPredicted RBP15.17■□□□□ 0.02
HMGA1-204ENST00000401473 PCDHB3Q9Y5E6 796 aa15.17■□□□□ 0.02
HMGA1-204ENST00000401473 DSPP15924 2871 aaKnown RBP15.17■□□□□ 0.02
HMGA1-204ENST00000401473 FOXE1O00358 373 aaPredicted RBP15.16■□□□□ 0.02
HMGA1-204ENST00000401473 FOXS1O43638 330 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 ULK1O75385 1050 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 KIAA0754O94854 1291 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 CAPNS1P04632 268 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 SMIM10L1P0DMW3 83 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 UROSP10746 265 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 ALAS2P22557 587 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 GSTM2P28161 218 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 HMOX2P30519 316 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 OCRLQ01968 901 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 IFT88Q13099 833 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 ADPRMQ3LIE5 342 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms