RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 JRKO75564 520 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CD22P20273 847 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 AHRP35869 848 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 EFNA3P52797 238 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 HYAL2Q12891 473 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PDK4Q16654 411 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PFKFB4Q16877 469 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 XKR6Q5GH73 641 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 COLEC12Q5KU26 742 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 DCAF10Q5QP82 559 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ADNP2Q6IQ32 1131 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 KLC3Q6P597 504 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ADGRD1Q6QNK2 874 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 KIRREL2Q6UWL6 708 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TAOK1Q7L7X3 1001 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 IP6K3Q96PC2 410 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 KLHL31Q9H511 634 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ANKHQ9HCJ1 492 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 GPRC5BQ9NZH0 403 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 HCN3Q9P1Z3 774 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 C3orf18Q9UK00 162 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SLC22A7Q9Y694 548 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 OR2W5A6NFC9 320 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SYCE1LA8MT33 242 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 IDSB3KWA1 339 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 B8ZZF3 427 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 H0YIG0 161 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CLGNO14967 610 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 DNAJB6O75190 326 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 H2AFYO75367 372 aaKnown RBP13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 RDH16O75452 317 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 KLHL18O94889 574 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SNRPAP09012 282 aaKnown RBP13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZNF888P0CJ79 500 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CNTFP26441 200 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 RRADP55042 308 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 RGS1Q08116 209 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 DOC2AQ14183 400 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 DEFB134Q4QY38 66 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TECRLQ5HYJ1 363 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 FAAH2Q6GMR7 532 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TCTN3Q6NUS6 607 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TMIGD1Q6UXZ0 262 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZC3H7AQ8IWR0 971 aaKnown RBP13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 EIF1ADQ8N9N8 165 aaKnown RBP13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TRPV3Q8NET8 790 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 FDCSPQ8NFU4 85 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 OR5T3Q8NGG3 340 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 OR51Q1Q8NH59 317 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NT5CQ8TCD5 201 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CREB3L4Q8TEY5 395 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 C8orf44Q96CB5 159 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SLC25A23Q9BV35 468 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CAPS2Q9BXY5 557 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TGIF2Q9GZN2 237 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 AICDAQ9GZX7 198 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MKKSQ9NPJ1 570 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SEMA3GQ9NS98 782 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 FBXL4Q9UKA2 621 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ESPNB1AK53 854 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 C4orf51C9J302 202 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 BMP10O95393 424 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 GFAPP14136 432 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ALOX12P18054 663 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CXCR2P25025 360 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 XCR1P46094 333 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 RAB8AP61006 207 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 OLR1P78380 273 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CHIT1Q13231 466 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 HERC3Q15034 1050 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 RBBP7Q16576 425 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 LACTB2Q53H82 288 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 LRRC70Q7Z2Q7 622 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 AFAP1L2Q8N4X5 818 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CLEC1AQ8NC01 280 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 OR11G2Q8NGC1 345 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 UTP15Q8TED0 518 aaKnown RBP13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 UBTD2Q8WUN7 234 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 UBLCP1Q8WVY7 318 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NACC2Q96BF6 587 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 FER1L6-AS2Q96M78 137 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NUDT9Q9BW91 350 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SLC6A16Q9GZN6 736 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 EHD1Q9H4M9 534 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CPSF2Q9P2I0 782 aaKnown RBP13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 OPTCQ9UBM4 332 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TBK1Q9UHD2 729 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MKL2Q9ULH7 1088 aa13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZNF490Q9ULM2 529 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB1-202ENST00000399079 FASNP49327 2511 aaKnown RBP13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 K7EPI3 171 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 KLK8O60259 260 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 GALR3O60755 368 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CEACAM4O75871 244 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SIX3O95343 332 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TBX6O95947 436 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SHBGP04278 402 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 HEXBP07686 556 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SERPINA6P08185 405 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms