RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 IL12BP29460 328 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 TBPL1P62380 186 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 KIAA0319Q5VV43 1072 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 EGFLAMQ63HQ2 1017 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 OGFOD2Q6N063 350 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 HDDC2Q7Z4H3 204 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 RNF130Q86XS8 419 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 CPXM2Q8N436 756 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 TOX2Q96NM4 488 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 IL4I1Q96RQ9 567 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 SORT1Q99523 831 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 C17orf62Q9BQA9 187 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 CXCL16Q9H2A7 254 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 TOR3AQ9H497 397 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 MKKSQ9NPJ1 570 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 HSFX1Q9UBD0 423 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 EFCAB9A8MZ26 197 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 TLR4O00206 839 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 C6P13671 934 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 HRH2P25021 359 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 VIPR2P41587 438 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 ERVPABLB-1P60509 514 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 FADDQ13158 208 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 LASP1Q14847 261 aaKnown RBP13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 CDKL4Q5MAI5 379 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 KLHDC9Q8NEP7 349 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 SLC12A9Q9BXP2 914 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 UCK2Q9BZX2 261 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 STATHP02808 62 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 T-ENOLP0DO92 83 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 HSD17B1P14061 328 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 PRKACGP22612 351 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 CDKN1CP49918 316 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 FAM26DQ5JW98 314 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 LCN1P1Q5VSP4 162 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 CXorf57Q6NSI4 855 aaKnown RBP13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 PIANPQ8IYJ0 282 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 PNPLA1Q8N8W4 532 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 KCT2Q8NC54 265 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 KXD1Q9BQD3 176 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 FARSBQ9NSD9 589 aaKnown RBP13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 IRAK3Q9Y616 596 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 FAM240BA0A1B0GVZ2 78 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 UBE2QL1A1L167 161 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 COQ9O75208 318 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 C7P10643 843 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 KDELR2P33947 212 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 ST3GAL3Q11203 375 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 RUNX3Q13761 415 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 TAS1R1Q7RTX1 841 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 IQCHQ86VS3 1027 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 OR5P2Q8WZ92 322 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 ALPK1Q96QP1 1244 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 SDR39U1Q9NRG7 319 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 HCN4Q9Y3Q4 1203 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 SMAD6O43541 496 aaKnown RBP13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 KRT33AO76009 404 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 HTR6P50406 440 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 NTHL1P78549 312 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 SPRED3Q2MJR0 410 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 PIGGQ5H8A4 983 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 UFD1Q92890 307 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 CRELD1Q96HD1 420 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 SLC2A4RGQ9NR83 387 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 ADAMTS6Q9UKP5 1117 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 EMCNQ9ULC0 261 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 SESN1Q9Y6P5 492 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 GNSP15586 552 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 UQCRC2P22695 453 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 SEPHS1P49903 392 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 SYT16Q17RD7 645 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 ZNF423Q2M1K9 1284 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 CRTC2Q53ET0 693 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 KIAA1614Q5VZ46 1190 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 RPTNQ6XPR3 784 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 HTR3DQ70Z44 454 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 OR10H4Q8NGA5 316 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 KHSRPQ92945 711 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 FBXL20Q96IG2 436 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 DPYSL5Q9BPU6 564 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 TAPBPLQ9BX59 468 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 TRIM8Q9BZR9 551 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 SMURF2Q9HAU4 748 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 CLCA3PQ9Y6N3 262 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 CPSF4LA6NMK7 179 aaKnown RBP13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 ATP5A1P25705 553 aaKnown RBP13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 ZNF140P52738 457 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 BNC1Q01954 994 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 KRT74Q7RTS7 529 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 KLHL6Q8WZ60 621 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 CDADC1Q9BWV3 514 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 LYARQ9NX58 379 aaKnown RBP13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 ANKRD12Q6UB98 2062 aa13.73□□□□□ -0.21
PCDHGA11-201ENST00000398587 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 A0A1W2PQU0 124 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 H0YAE9 185 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 REM1O75628 298 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 ECDO95905 644 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 SMSP52788 366 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 AMZ1Q400G9 498 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms