RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 KCTD11Q693B1 232 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 TMEM207Q6UWW9 146 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 RAPH1Q70E73 1250 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 FCRLAQ7L513 359 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 CCDC83Q8IWF9 413 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 CNTN4Q8IWV2 1026 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 TDHQ8IZJ6 230 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 DCLK2Q8N568 766 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 LRTM2Q8N967 370 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 SLC37A3Q8NCC5 494 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 FAM76AQ8TAV0 307 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 METTL21AQ8WXB1 218 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 CDKN2AIPNLQ96HQ2 116 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 ALKBH7Q9BT30 221 aaPredicted RBP2.41□□□□□ -2.02
CD47-203ENST00000398258 ACPTQ9BZG2 426 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 FAM49AQ9H0Q0 323 aaPredicted RBP2.41□□□□□ -2.02
CD47-203ENST00000398258 DBNDD1Q9H9R9 158 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 SLC52A3Q9NQ40 469 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 PRMT8Q9NR22 394 aaPredicted RBP2.41□□□□□ -2.02
CD47-203ENST00000398258 MAN2C1Q9NTJ4 1040 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 EXOC1Q9NV70 894 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 PANK4Q9NVE7 773 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 RNF186Q9NXI6 227 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 TRPC4Q9UBN4 977 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 C19orf25Q9UFG5 118 aaPredicted RBP2.41□□□□□ -2.02
CD47-203ENST00000398258 MAD2L2Q9UI95 211 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 TNNQ9UQP3 1299 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 C2CD2Q9Y426 696 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 SPAG9O60271 1321 aaKnown RBP2.41□□□□□ -2.02
CD47-203ENST00000398258 SPATA31D1Q6ZQQ2 1576 aa2.4□□□□□ -2.02
CD47-203ENST00000398258 GPRASP1Q5JY77 1395 aa2.4□□□□□ -2.02
CD47-203ENST00000398258 IGHV4-4A0A075B6R2 117 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 A0A0A6YYC8 382 aaPredicted RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 NKX6-3A6NJ46 265 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 I3L1I5 382 aaPredicted RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 HTATSF1O43719 755 aaKnown RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 EXTL3O43909 919 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 ZG16O60844 167 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 CEACAM4O75871 244 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 CAVIN2O95810 425 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 AMBPP02760 352 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 CEACAM1P13688 526 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 GNB3P16520 340 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 EDNRAP25101 427 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 SSTR1P30872 391 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 SRD5A2P31213 254 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 MAGEB1P43366 347 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 OR3A2P47893 321 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 LEPRP48357 1165 aaKnown RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 SERPINH1P50454 418 aaKnown RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 GNB1P62873 340 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 CSNK2BP67870 215 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 ARF5P84085 180 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 AKAP17AQ02040 695 aaKnown RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 UBXN1Q04323 297 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 SLC34A1Q06495 639 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 NPRL3Q12980 569 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 SGCGQ13326 291 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 PPP2R5CQ13362 524 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 GRB14Q14449 540 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 HFEQ30201 348 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 CEP85LQ5SZL2 805 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 PM20D1Q6GTS8 502 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 GBP7Q8N8V2 638 aaPredicted RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 GPATCH11Q8N954 259 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 LPCAT1Q8NF37 534 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 ZNF501Q96CX3 271 aaPredicted RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 LGALS12Q96DT0 336 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 FBXO17Q96EF6 278 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 EEF2KMTQ96G04 330 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 C5orf30Q96GV9 206 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 F2RL3Q96RI0 385 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 TDRD1Q9BXT4 1180 aaKnown RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 OSBPL8Q9BZF1 889 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 SLC5A7Q9GZV3 580 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 RNF121Q9H920 327 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 PPANQ9NQ55 473 aaKnown RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 TBC1D13Q9NVG8 400 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 DNAJC11Q9NVH1 559 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 CWC25Q9NXE8 425 aaPredicted RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 TMEM181Q9P2C4 612 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 STX8Q9UNK0 236 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 GAB2Q9UQC2 676 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 FOXA2Q9Y261 457 aaPredicted RBP2.4□□□□□ -2.03
CD47-203ENST00000398258 PPP2R2CQ9Y2T4 447 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 STK36Q9NRP7 1315 aa2.4□□□□□ -2.03
CD47-203ENST00000398258 A0A087WW49 117 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 TMEM129A0AVI4 362 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 MAGEB16A2A368 324 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 SMIM30A4D0T7 59 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 SNURFLB1AK76 121 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 H3BMM5 538 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 RNF103O00237 685 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 FPGTO14772 594 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 PGRMC2O15173 223 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 KERAO60938 352 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 SAP30O75446 220 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 ZFAND5O76080 213 aa2.39□□□□□ -2.03
CD47-203ENST00000398258 TBX6O95947 436 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms