RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PPM1MQ96MI6 270 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 OR2A5Q96R48 311 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 AICDAQ9GZX7 198 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 ADAMTS20P59510 1910 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 LY6G6EA0A0G2JKS1 128 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 LRIT2A6NDA9 550 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 BBIP1A8MTZ0 92 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 ANKRD65E5RJM6 399 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 FBP2O00757 339 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 PRMT3O60678 531 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 MYO1DO94832 1006 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 PNLIPP16233 465 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 CAPN3P20807 821 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 POLR2JP52435 117 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 CYP4F2P78329 520 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 TCF15Q12870 199 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 TMEM35AQ53FP2 167 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 RNF44Q7L0R7 432 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 SLC45A3Q96JT2 553 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 CLMPQ9H6B4 373 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 AHSPQ9NZD4 102 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 BAIAP2L1Q9UHR4 511 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 MCM8Q9UJA3 840 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 PADI4Q9UM07 663 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 U3KQA8 63 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 SCN3AQ9NY46 2000 aa18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 COL5A1P20908 1838 aaPredicted RBP18.61■□□□□ 0.57
PDLIM2-205ENST00000397761 IGHV1OR21-1A0A087WYE8 117 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 PLPP1O14494 284 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 NDUFS4O43181 175 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 SH3BGRLO75368 114 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 KLHL18O94889 574 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 HNRNPH1P31943 449 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 BSGP35613 385 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 NHLH1Q02575 133 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 ZC3H14Q6PJT7 736 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 UBE3DQ7Z6J8 389 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 OR6C4Q8NGE1 309 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 NT5CQ8TCD5 201 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 TESCQ96BS2 214 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 RCN3Q96D15 328 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 SPDL1Q96EA4 605 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 TRAPPC9Q96Q05 1148 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 F2RL3Q96RI0 385 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 DPY30Q9C005 99 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 SLC6A16Q9GZN6 736 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 CHRNA10Q9GZZ6 450 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 EFCAB1Q9HAE3 211 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 LHX9Q9NQ69 397 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 C1GALT1Q9NS00 363 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 ADAM29Q9UKF5 820 aa18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 NUP214P35658 2090 aaPredicted RBP18.6■□□□□ 0.57
PDLIM2-205ENST00000397761 A0A1W2PP18 115 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 NR5A2O00482 541 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 PCDH7O60245 1069 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 ANXA4P09525 319 aaPredicted RBP18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 ZNF883P0CG24 379 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 PVRP15151 417 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 ASMTP46597 345 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 CLNS1AP54105 237 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 CORO7P57737 925 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 KCNK10P57789 538 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 GPLD1P80108 840 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 PWP1Q13610 501 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 HACD2Q6Y1H2 254 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 CARFQ8N187 725 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 WDR48Q8TAF3 677 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 RGMAQ96B86 450 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 TSSK3Q96PN8 268 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 CD180Q99467 661 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 ZFYVE21Q9BQ24 234 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 EBPLQ9BY08 206 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 ARRDC1-AS1Q9H2J1 176 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 NDUFAF1Q9Y375 327 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 R4GN57 208 aa18.59■□□□□ 0.57
PDLIM2-205ENST00000397761 ASPDHA6ND91 283 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 CFAP73A6NFT4 308 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 SAP18O00422 153 aaKnown RBP18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 GYG2O15488 501 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 SIGLEC6O43699 453 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 EEDO75530 441 aaKnown RBP18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 ST6GAL1P15907 406 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 PRPS1L1P21108 318 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 CYP4F3Q08477 520 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 ZNF763Q0D2J5 394 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 TLR1Q15399 786 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 VPS26BQ4G0F5 336 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 DNAL1Q4LDG9 190 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 REP15Q6BDI9 236 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 RETREG3Q86VR2 466 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 KIF2BQ8N4N8 673 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 KRTCAP2Q8N6L1 136 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 MS4A6EQ96DS6 147 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 EGLN2Q96KS0 407 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 CENPKQ9BS16 269 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 REXO4Q9GZR2 422 aaKnown RBP18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 DDX31Q9H8H2 851 aaKnown RBP18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 MAPRE3Q9UPY8 281 aa18.58■□□□□ 0.57
PDLIM2-205ENST00000397761 SPTBP11277 2137 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms