RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 HRASLS5Q96KN8 279 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 FCRL4Q96PJ5 515 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 MCCC1Q96RQ3 725 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 NEURL2Q9BR09 285 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 MND1Q9BWT6 205 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 GTPBP2Q9BX10 602 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 IPPKQ9H8X2 491 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 GPN1Q9HCN4 374 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ABI2Q9NYB9 513 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 VAPAQ9P0L0 249 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ARRDC5A6NEK1 342 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 PEX10O60683 326 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ICMTO60725 284 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 GNAO1P09471 354 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 NOS3P29474 1203 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 BRCC3P46736 316 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 MAN2A2P49641 1150 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF81P51508 661 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 RHOAP61586 193 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 OR4D1Q15615 310 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 CPSF6Q16630 551 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 PDE12Q6L8Q7 609 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 UNC5DQ6UXZ4 953 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF655Q8N720 491 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF614Q8N883 585 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 HJURPQ8NCD3 748 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 FBXO15Q8NCQ5 510 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 PMEPA1Q969W9 287 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 PPP1R16AQ96I34 528 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 RUVBL1Q9Y265 456 aaKnown RBP5.28□□□□□ -1.56
PTPRD-205ENST00000397611 DYRK1BQ9Y463 629 aa5.28□□□□□ -1.56
PTPRD-205ENST00000397611 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 SLC12A8A0AV02 714 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 ANKRD34BA5PLL1 514 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 H3BNC9 293 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 OXTRP30559 389 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 GJA5P36382 358 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 DGKEP52429 567 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 PLA2G16P53816 162 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 PSMD4P55036 377 aaKnown RBP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 RNLSQ5VYX0 342 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 TPGS2Q68CL5 300 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 LIN54Q6MZP7 749 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 CAPN13Q6MZZ7 669 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 DUS1LQ6P1R4 473 aaKnown RBP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 FAHD1Q6P587 224 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 LAPTM4BQ86VI4 370 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 MSRB3Q8IXL7 192 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 GPR156Q8NFN8 814 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 SCAMP5Q8TAC9 235 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 ING5Q8WYH8 240 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 TMEM175Q9BSA9 504 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 WACQ9BTA9 647 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 SLA2Q9H6Q3 261 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 SNX6Q9UNH7 406 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 STON1Q9Y6Q2 735 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 IGLV3-16A0A075B6K0 115 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 PGRMC2O15173 223 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 OR2B3O76000 313 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 C8GP07360 202 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 DNAJA1P31689 397 aaKnown RBP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 CLCN7P51798 805 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF177Q13360 481 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 PAN2Q504Q3 1202 aaKnown RBP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 XKRXQ6PP77 449 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 NXPE1Q8N323 547 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 COQ8AQ8NI60 647 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 NPLOC4Q8TAT6 608 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 HASPINQ8TF76 798 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 NDRG1Q92597 394 aaKnown RBP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 LRCH3Q96II8 777 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 KLHL5Q96PQ7 755 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 COPS8Q99627 209 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 LPIN3Q9BQK8 851 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 SMURF1Q9HCE7 757 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 INTS7Q9NVH2 962 aaKnown RBP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 CNOT2Q9NZN8 540 aaKnown RBP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 SLC27A5Q9Y2P5 690 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 PPIL1Q9Y3C6 166 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 PCDHGB5Q9Y5G0 923 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 RGS13O14921 159 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 PLATP00750 562 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 F11P03951 625 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 MPC1LP0DKB6 136 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 GAAP10253 952 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 CD72P21854 359 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 TIAL1Q01085 375 aaKnown RBP eCLIP5.27□□□□□ -1.57
PTPRD-205ENST00000397611 NOMO2Q5JPE7 1267 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 HECTD3Q5T447 861 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 GPRC6AQ5T6X5 926 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 MFSD4AQ8N468 514 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 MYOCQ99972 504 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 SLITRK2Q9H156 845 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 TRPM5Q9NZQ8 1165 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 PHF11Q9UIL8 331 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 GSAPA4D1B5 854 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 ASPDHA6ND91 283 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 A8MX80 341 aa5.27□□□□□ -1.57
PTPRD-205ENST00000397611 CDC7O00311 574 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms