RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CTSFQ9UBX1 484 aa24.09■■□□□ 1.45
TSPAN4-207ENST00000397411 SLC22A7Q9Y694 548 aa24.09■■□□□ 1.45
TSPAN4-207ENST00000397411 ZFHX4Q86UP3 3567 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 LRRC14BA6NHZ5 514 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 H0YIG0 161 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 TK2O00142 265 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 PEX12O00623 359 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 SIX3O95343 332 aaPredicted RBP24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 GSTM2P28161 218 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 STXBP1P61764 594 aaKnown RBP24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 HERC3Q15034 1050 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 TBCCQ15814 346 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 TOR1AIP1Q5JTV8 583 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 METTL2BQ6P1Q9 378 aaKnown RBP24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.08■■□□□ 1.451e-6■■■■■ 92.8
TSPAN4-207ENST00000397411 ARHGEF39Q8N4T4 335 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 STT3BQ8TCJ2 826 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 MZB1Q8WU39 189 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 TTC9Q92623 222 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 WDR34Q96EX3 536 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 ROPN1BQ9BZX4 212 aaPredicted RBP24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 SLC26A1Q9H2B4 701 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 IPPKQ9H8X2 491 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 ACTR8Q9H981 624 aa24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 ROPN1Q9HAT0 212 aaPredicted RBP24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 RALYQ9UKM9 306 aaKnown RBP24.08■■□□□ 1.45
TSPAN4-207ENST00000397411 FOXO6A8MYZ6 492 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 STX16-NPEPL1H3BU86 382 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 SGK494L7N484 410 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 STX16O14662 325 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 FFAR3O14843 346 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 GPR42O15529 346 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 CNOT3O75175 753 aaKnown RBP24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 NSA2O95478 260 aaKnown RBP24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 SERPINA6P08185 405 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 EPORP19235 508 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 CCT5P48643 541 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 GOLGA7Q7Z5G4 137 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 RIBC1Q8N443 379 aaPredicted RBP24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 PPP4R1Q8TF05 950 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 IP6K3Q96PC2 410 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 MKKSQ9NPJ1 570 aaPredicted RBP24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 PLAAQ9Y263 795 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 NAALAD2Q9Y3Q0 740 aa24.07■■□□□ 1.44
TSPAN4-207ENST00000397411 LAMA5O15230 3695 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 EIF4E1BA6NMX2 242 aaKnown RBP24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 PRAMEF4O60810 478 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 GLRA3O75311 464 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 KLHL18O94889 574 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 ZGLP1P0C6A0 271 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 ZNF888P0CJ79 500 aaPredicted RBP24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 PCNAP12004 261 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 ALOX12P18054 663 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 HPDP32754 393 aaPredicted RBP24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 CASP2P42575 452 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 FOXL2P58012 376 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 RAB8AP61006 207 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 MAT1AQ00266 395 aaKnown RBP24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 VWA2Q5GFL6 755 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 PRAMEF9Q5VWM5 478 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 NIPAL1Q6NVV3 410 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 MED27Q6P2C8 311 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 WBP1Q96G27 269 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 SEC16BQ96JE7 1060 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 FAR2Q96K12 515 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 CRB3Q9BUF7 120 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 ZNF490Q9ULM2 529 aaPredicted RBP24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 MAP4K5Q9Y4K4 846 aa24.06■■□□□ 1.44
TSPAN4-207ENST00000397411 ARGFXA6NJG6 315 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 COPEO14579 308 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 WFS1O76024 890 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 IGHEP01854 428 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 SYT16Q17RD7 645 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 LINC00303Q3SY05 128 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 DEFB134Q4QY38 66 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 MFSD4BQ5TF39 518 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 PRSS41Q7RTY9 318 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 MREGQ8N565 214 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 AMER3Q8N944 861 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 CREB3L4Q8TEY5 395 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 SLC6A16Q9GZN6 736 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 KLHL31Q9H511 634 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 NOL11Q9H8H0 719 aaKnown RBP24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 C14orf105Q9NVL8 296 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 HCN3Q9P1Z3 774 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 GRID1Q9ULK0 1009 aa24.05■■□□□ 1.44
TSPAN4-207ENST00000397411 VSTM2BA6NLU5 285 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 E2F3O00716 465 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 ATXN7O15265 892 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 RDH16O75452 317 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 CLEC3AO75596 197 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 KRT4P19013 534 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 CCNG1P51959 295 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 EMP2P54851 167 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 KLC1Q07866 573 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 RBBP7Q16576 425 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 LIPJQ5W064 366 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 CCDC63Q8NA47 563 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 OR51Q1Q8NH59 317 aa24.04■■□□□ 1.44
TSPAN4-207ENST00000397411 ADAMTS17Q8TE56 1095 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms