RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CTRCQ99895 268 aa22.51■■□□□ 1.19
TSPAN4-203ENST00000397397 APMAPQ9HDC9 416 aa22.51■■□□□ 1.19
TSPAN4-203ENST00000397397 FBXO8Q9NRD0 319 aa22.51■■□□□ 1.19
TSPAN4-203ENST00000397397 MARCOQ9UEW3 520 aaPredicted RBP22.51■■□□□ 1.19
TSPAN4-203ENST00000397397 PISDQ9UG56 409 aa22.51■■□□□ 1.19
TSPAN4-203ENST00000397397 DNAJC15Q9Y5T4 150 aa22.51■■□□□ 1.19
TSPAN4-203ENST00000397397 FOXE1O00358 373 aaPredicted RBP22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 TXNDC9O14530 226 aa22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 POLR1CO15160 346 aaPredicted RBP22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 TGFB1P01137 390 aa22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 SERPINA6P08185 405 aa22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 ETV5P41161 510 aa22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 IL11RAQ14626 422 aa22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 PRTGQ2VWP7 1150 aa22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 BPHLQ86WA6 291 aaPredicted RBP22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 PPP1R3BQ86XI6 285 aa22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 MS4A8Q9BY19 250 aa22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 SATB2Q9UPW6 733 aa22.5■■□□□ 1.19
TSPAN4-203ENST00000397397 A0A1W2PNU3 283 aaPredicted RBP22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 PMS2P1A4D2B8 440 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 H3BMH7 237 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 SH3BGRLO75368 114 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 SKAP2O75563 359 aaPredicted RBP22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 VIMP08670 466 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 FGF5P12034 268 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 ZNF33BQ06732 778 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 FOXC1Q12948 553 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 TOR1AIP1Q5JTV8 583 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 MANEAQ5SRI9 462 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 TLDC1Q6P9B6 456 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 DDIASQ8IXT1 998 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 TTC29Q8NA56 475 aaPredicted RBP22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 KCT2Q8NC54 265 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 CMTM7Q96FZ5 175 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 FAR2Q96K12 515 aa22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 RUVBL1Q9Y265 456 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-203ENST00000397397 ZSCAN9O15535 394 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 TBX6O95947 436 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 STXBP1P61764 594 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 HYAL2Q12891 473 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 CSTF3Q12996 717 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 GRM7Q14831 915 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 PDCD2Q16342 344 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 PIWIL2Q8TC59 973 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 SLC6A16Q9GZN6 736 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 OR51B5Q9H339 312 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 TUBB1Q9H4B7 451 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 BRF2Q9HAW0 419 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 PSD3Q9NYI0 1048 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 PTGDR2Q9Y5Y4 395 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 FITM1A5D6W6 292 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 LRIT2A6NDA9 550 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 PIP5K1BO14986 540 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 EDF1O60869 148 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 LINC00032P0C843 101 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 HSD3B1P14060 373 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 PTX3P26022 381 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 HSD3B2P26439 372 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 RAB15P59190 212 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 IMPG1Q17R60 797 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 CEACAM20Q6UY09 585 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 CHSY3Q70JA7 882 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 TMEM126BQ8IUX1 230 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 ZCCHC10Q8TBK6 192 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 F2RL3Q96RI0 385 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 TAAR9Q96RI9 348 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 SERPINI1Q99574 410 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 KLHL31Q9H511 634 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 ENAMQ9NRM1 1142 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 PPT2Q9UMR5 302 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 SLC12A4Q9UP95 1085 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 WASF3Q9UPY6 502 aa22.48■■□□□ 1.19
TSPAN4-203ENST00000397397 SPTBP11277 2137 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 SERTM1A2A2V5 107 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 HYKKA2RU49 373 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 URADA6NGE7 173 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 SLCO1B7G3V0H7 640 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 HNRNPH1P31943 449 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 GNGT1P63211 74 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 COL9A2Q14055 689 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 DCAF12Q5T6F0 453 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 DEPDC1Q5TB30 811 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 PRAMEF17Q5VTA0 474 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 KHDRBS2Q5VWX1 349 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 PWWP2BQ6NUJ5 590 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 RNF165Q6ZSG1 346 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 TRIM46Q7Z4K8 759 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 GBP7Q8N8V2 638 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 PMEPA1Q969W9 287 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 ACPTQ9BZG2 426 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 REXO4Q9GZR2 422 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 AICDAQ9GZX7 198 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 VTI1BQ9UEU0 232 aa22.47■■□□□ 1.19
TSPAN4-203ENST00000397397 SLC28A1O00337 649 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 SAP18O00422 153 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 ZNF749O43361 778 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 SCRG1O75711 98 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 ETHE1O95571 254 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 SPINK2P20155 84 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 HK2P52789 917 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms