RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ANAPC5Q9UJX4 755 aa8.83□□□□□ -1
NEDD9-203ENST00000397378 ZNF839A8K0R7 811 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 MYO1CO00159 1063 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 HS6ST1O60243 411 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 MFAP3LO75121 409 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 TPM1P09493 284 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 BMP7P18075 431 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 RPS3P23396 243 aaKnown RBP eCLIP8.82□□□□□ -1
NEDD9-203ENST00000397378 HSD17B2P37059 387 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 BCL6P41182 706 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 CETN2P41208 172 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 MAGEA1P43355 309 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 XCR1P46094 333 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 CYB561P49447 251 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 SNRPNP63162 240 aaKnown RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 ABATP80404 500 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 USP10Q14694 798 aaKnown RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 SFT2D3Q587I9 215 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 ZNF468Q5VIY5 522 aaPredicted RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 CAVIN1Q6NZI2 390 aaKnown RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 CAPN12Q6ZSI9 719 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 LDB1Q86U70 411 aaPredicted RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 RPS19BP1Q86WX3 136 aaKnown RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 ZNF227Q86WZ6 799 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 CXorf67Q86X51 503 aaPredicted RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 MPP5Q8N3R9 675 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 PLPP5Q8NEB5 264 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 C16orf52Q8NHV5 167 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 MCOLN3Q8TDD5 553 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 ELP5Q8TE02 316 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 EBNA1BP2Q99848 306 aaKnown RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 CDCP1Q9H5V8 836 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 PLEKHF2Q9H8W4 249 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 CATSPERZQ9NTU4 200 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 MARCH4Q9P2E8 410 aaPredicted RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 TAC3Q9UHF0 121 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 R3HDM2Q9Y2K5 976 aaKnown RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 KLF13Q9Y2Y9 288 aaPredicted RBP8.82□□□□□ -1
NEDD9-203ENST00000397378 TCAF1Q9Y4C2 921 aa8.82□□□□□ -1
NEDD9-203ENST00000397378 OR2W5A6NFC9 320 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 ARHGEF33A8MVX0 844 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 MAGEB17A8MXT2 336 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 NDC80O14777 642 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 HAT1O14929 419 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 CD3EAPO15446 510 aaKnown RBP8.81□□□□□ -1
NEDD9-203ENST00000397378 PHF1O43189 567 aaPredicted RBP8.81□□□□□ -1
NEDD9-203ENST00000397378 KIF5CO60282 957 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 SMPD2O60906 423 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 PSIP1O75475 530 aaKnown RBP8.81□□□□□ -1
NEDD9-203ENST00000397378 PDE9AO76083 593 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 TFEBP19484 476 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 IL10P22301 178 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 TACR1P25103 407 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 TRHRP34981 398 aaPredicted RBP8.81□□□□□ -1
NEDD9-203ENST00000397378 RFC3P40938 356 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 PNLIPRP1P54315 467 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 GDF10P55107 478 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 RWDD2BP57060 319 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 SLC26A5P58743 744 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 MPP1Q00013 466 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 RHAGQ02094 409 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 RUNX1T1Q06455 604 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 ACTN3Q08043 901 aaPredicted RBP8.81□□□□□ -1
NEDD9-203ENST00000397378 ABRAXAS2Q15018 415 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 NSDHLQ15738 373 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 SLC25A35Q3KQZ1 300 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 CMPK2Q5EBM0 449 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 EMC4Q5J8M3 183 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 ARHGAP11AQ6P4F7 1023 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 PRSS41Q7RTY9 318 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 YTHDF3Q7Z739 585 aaKnown RBP8.81□□□□□ -1
NEDD9-203ENST00000397378 LIX1LQ8IVB5 337 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 ULK2Q8IYT8 1036 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 SHISA5Q8N114 240 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 ARMC10Q8N2F6 343 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 ZNF592Q92610 1267 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 TMEM125Q96AQ2 219 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 OR1F2PQ96R84 312 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 ATG10Q9H0Y0 220 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 FAM114A2Q9NRY5 505 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 HCN3Q9P1Z3 774 aa8.81□□□□□ -1
NEDD9-203ENST00000397378 KCNE1BA0A087WTH5 132 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 A0A0G2JNJ9 132 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 GOLGA6L9A6NEM1 432 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 E7ENX8 843 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 KLRC4-KLRK1H3BQV0 150 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 NDUFS3O75489 264 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 SLC16A8O95907 504 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 CATP04040 527 aaKnown RBP8.8□□□□□ -1
NEDD9-203ENST00000397378 IL1RNP18510 177 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 HRH2P25021 359 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 TPP2P29144 1249 aaPredicted RBP8.8□□□□□ -1
NEDD9-203ENST00000397378 HLCSP50747 726 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 EIF3BP55884 814 aaKnown RBP8.8□□□□□ -1
NEDD9-203ENST00000397378 MLF1P58340 268 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 RPS15AP62244 130 aaKnown RBP8.8□□□□□ -1
NEDD9-203ENST00000397378 TAP2Q03519 686 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 TSTA3Q13630 321 aaPredicted RBP8.8□□□□□ -1
NEDD9-203ENST00000397378 DAZAP2Q15038 168 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms