RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 G6PDP11413 515 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 SLC7A1P30825 629 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 TBPL1P62380 186 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 MRPS35P82673 323 aaKnown RBP14.31□□□□□ -0.12
CAPN3-207ENST00000397200 DAB2P98082 770 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 TAP2Q03519 686 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 PCDH1Q08174 1060 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 PTCHD3Q3KNS1 767 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 IL23RQ5VWK5 629 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 CAPN13Q6MZZ7 669 aaPredicted RBP14.31□□□□□ -0.12
CAPN3-207ENST00000397200 ASCL5Q7RTU5 278 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 ARPINQ7Z6K5 226 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 PTRH1Q86Y79 214 aaKnown RBP14.31□□□□□ -0.12
CAPN3-207ENST00000397200 C2orf73Q8N5S3 287 aaPredicted RBP14.31□□□□□ -0.12
CAPN3-207ENST00000397200 LMNTD1Q8N9Z9 388 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 CATSPER1Q8NEC5 780 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 ADCY4Q8NFM4 1077 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 OR56A3Q8NH54 315 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 RHBDD1Q8TEB9 315 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 SMPDL3AQ92484 453 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 VPS33AQ96AX1 596 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 PYCR2Q96C36 320 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 BTBD9Q96Q07 612 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 CCDC177Q9NQR7 707 aaPredicted RBP14.31□□□□□ -0.12
CAPN3-207ENST00000397200 PCM1Q15154 2024 aa14.31□□□□□ -0.12
CAPN3-207ENST00000397200 LY6G6EA0A0G2JKS1 128 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 AQP12BA6NM10 295 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ULK1O75385 1050 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 KRT6AP02538 564 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 KRT6BP04259 564 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 CD59P13987 128 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ACPPP15309 386 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 PCSK2P16519 638 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ATP6V1B2P21281 511 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 VARSP26640 1264 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 KRT6CP48668 564 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 PPM1FP49593 454 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 DUSP3P51452 185 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 EEFSECP57772 596 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 RPL38P63173 70 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 NFYCQ13952 458 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 PROX2Q3B8N5 592 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 TIGD2Q4W5G0 525 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 KLHL35Q6PF15 583 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ZNF438Q7Z4V0 828 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 AQP12AQ8IXF9 295 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 LRRC56Q8IYG6 542 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 LINC01555Q8NAE3 123 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 GATA6Q92908 595 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 SLCO4A1Q96BD0 722 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 HBEGFQ99075 208 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 PKP2Q99959 881 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 FARSBQ9NSD9 589 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ACTR3BQ9P1U1 418 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ZNF490Q9ULM2 529 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 NEUROG3Q9Y4Z2 214 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 U3KQA8 63 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 COL5A1P20908 1838 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 WDR87Q6ZQQ6 2873 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 CPED1A4D0V7 1026 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 OR6C74A6NCV1 312 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 FFAR3O14843 346 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 GPR42O15529 346 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ZW10O43264 779 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 UGDHO60701 494 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 RSL1D1O76021 490 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 UBXN7O94888 489 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 LDOC1O95751 146 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 CHRM5P08912 532 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 PIM1P11309 404 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 CKMT1AP12532 417 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 AMD1P17707 334 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ALDH4A1P30038 563 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 GPR3P46089 330 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 EPHA4P54764 986 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 AQP4P55087 323 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 YBX1P67809 324 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ZNF33BQ06732 778 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 CAPRIN1Q14444 709 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 THEMIS2Q5TEJ8 643 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 SUSD1Q6UWL2 747 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 THOC6Q86W42 341 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 OOSP2Q86WS3 158 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 DHFR2Q86XF0 187 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 NAXDQ8IW45 347 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 KIAA2013Q8IYS2 634 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 GLB1L3Q8NCI6 653 aaPredicted RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 OR10G6Q8NH81 332 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 NAT6Q93015 286 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 CCDC74AQ96AQ1 378 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 CNDP2Q96KP4 475 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 LRGUKQ96M69 825 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 SGPP1Q9BX95 441 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ACPTQ9BZG2 426 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 TRIM15Q9C019 465 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ACTR8Q9H981 624 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 LRTM1Q9HBL6 345 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 DNAJC11Q9NVH1 559 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 INTS7Q9NVH2 962 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ARMC1Q9NVT9 282 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms