RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PTTG1O95997 202 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 ABCB1P08183 1280 aaPredicted RBP13.41□□□□□ -0.26
NUP98-204ENST00000397004 ETFAP13804 333 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 COX7A2P14406 83 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 PTPN2P17706 415 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 PRPS1L1P21108 318 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 CTSOP43234 321 aaPredicted RBP13.41□□□□□ -0.26
NUP98-204ENST00000397004 GJA8P48165 433 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 ELP6Q0PNE2 266 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 EXOC3L2Q2M3D2 409 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 METTL2BQ6P1Q9 378 aaKnown RBP13.41□□□□□ -0.26
NUP98-204ENST00000397004 LSRQ86X29 649 aaPredicted RBP13.41□□□□□ -0.26
NUP98-204ENST00000397004 MS4A12Q9NXJ0 267 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 RFXAPO00287 272 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 SEMA7AO75326 666 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 IGFBP1P08833 259 aaPredicted RBP13.41□□□□□ -0.26
NUP98-204ENST00000397004 NKX3-2P78367 333 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 DDX39BQ13838 428 aaKnown RBP13.41□□□□□ -0.26
NUP98-204ENST00000397004 VEZF1Q14119 521 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.41□□□□□ -0.26
NUP98-204ENST00000397004 NRARPQ7Z6K4 114 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 FBXO22Q8NEZ5 403 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 CHAC2Q8WUX2 184 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 CD84Q9UIB8 345 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 DPM1O60762 260 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 GBAP04062 536 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 RPLP0P05388 317 aaKnown RBP13.4□□□□□ -0.26
NUP98-204ENST00000397004 PCYT1AP49585 367 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 LRRC26Q2I0M4 334 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 HKDC1Q2TB90 917 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 TUBA3EQ6PEY2 450 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 NEK10Q6ZWH5 1172 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 P3H2Q8IVL5 708 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 SOCS4Q8WXH5 440 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 HHIPL1Q96JK4 782 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 DOHHQ9BU89 302 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 SPATA6Q9NWH7 488 aaPredicted RBP13.4□□□□□ -0.26
NUP98-204ENST00000397004 EHD3Q9NZN3 535 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 SNX8Q9Y5X2 465 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 GFYI3L273 518 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 ETV6P41212 452 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 HTR3AP46098 478 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 FAM217AQ8IXS0 508 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 VANGL1Q8TAA9 524 aaPredicted RBP13.4□□□□□ -0.26
NUP98-204ENST00000397004 PLD4Q96BZ4 506 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 FAM193BQ96PV7 902 aaPredicted RBP13.4□□□□□ -0.26
NUP98-204ENST00000397004 ROGDIQ9GZN7 287 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 ANKHQ9HCJ1 492 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 ACSL6Q9UKU0 697 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 VCANP13611 3396 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 TNFRSF11BO00300 401 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 ARHGAP33O14559 1287 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 RGS13O14921 159 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 OR1D2P34982 312 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 SPAM1P38567 509 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 STK19P49842 368 aaPredicted RBP13.4□□□□□ -0.26
NUP98-204ENST00000397004 SELENOWP63302 87 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 BAK1Q16611 211 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 Q5BKY6 102 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 C10orf62Q5T681 223 aaPredicted RBP13.4□□□□□ -0.26
NUP98-204ENST00000397004 FAM180BQ6P0A1 224 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 LRRC70Q7Z2Q7 622 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 OR10G2Q8NGC3 310 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 OR4K1Q8NGD4 311 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 TAPBPLQ9BX59 468 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 CCDC59Q9P031 241 aaKnown RBP13.4□□□□□ -0.26
NUP98-204ENST00000397004 STOML2Q9UJZ1 356 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 PCDHGB3Q9Y5G1 929 aa13.4□□□□□ -0.26
NUP98-204ENST00000397004 SEPT4O43236 478 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 CYP7B1O75881 506 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 IDSP22304 550 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 CXCR2P25025 360 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 LIMS1P48059 325 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 CDH12P55289 794 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 ZNF79Q15937 498 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 ATAD3CQ5T2N8 411 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 MMAAQ8IVH4 418 aaKnown RBP13.39□□□□□ -0.27
NUP98-204ENST00000397004 PLSCR3Q9NRY6 295 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 KCTD5Q9NXV2 234 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 RHCGQ9UBD6 479 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 CLEC2DQ9UHP7 191 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 A3GALT2U3KPV4 340 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 PRRC2BQ5JSZ5 2229 aaKnown RBP13.39□□□□□ -0.27
NUP98-204ENST00000397004 IGLV3-16A0A075B6K0 115 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 PRAMEF33A0A0G2JMD5 474 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 WWP2O00308 870 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 HOXC11O43248 304 aaPredicted RBP13.39□□□□□ -0.27
NUP98-204ENST00000397004 SUV39H1O43463 412 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 PRAMEF10O60809 474 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 JUPP14923 745 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 HBA1P69905 142 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 ZNF45Q02386 682 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 AGAP6Q5VW22 663 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 BBS7Q8IWZ6 715 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 SPPL2AQ8TCT8 520 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 SKA2Q8WVK7 121 aaPredicted RBP13.39□□□□□ -0.27
NUP98-204ENST00000397004 ST6GAL2Q96JF0 529 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 AGAP4Q96P64 663 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 V9GYH0 126 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 SCAMP2O15127 329 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms