RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ARPC4-TTLL3A0A0A6YYG9 625 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 OPN1SWP03999 348 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 TMBIM6P55061 237 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 TGFBIQ15582 683 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 PHTF2Q8N3S3 785 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 ASCC1Q8N9N2 400 aaKnown RBP13.57□□□□□ -0.24
COL4A3-202ENST00000396578 ESAMQ96AP7 390 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 EFCAB11Q9BUY7 163 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 TIGARQ9NQ88 270 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 IL36AQ9UHA7 158 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 TLR6Q9Y2C9 796 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 MEN1O00255 615 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 SLC31A1O15431 190 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 RFPL1O75677 317 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 CSF2P04141 144 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 CDK6Q00534 326 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ELMOD2Q8IZ81 293 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 SAMD12Q8N8I0 201 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ELP5Q8TE02 316 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 HSH2DQ96JZ2 352 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ACTR6Q9GZN1 396 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ATRNO75882 1429 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 TVP23AA6NH52 213 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 MATN1P21941 496 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ADH6P28332 368 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 CAP1Q01518 475 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 MEP1AQ16819 746 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 PAQR3Q6TCH7 311 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ZNF367Q7RTV3 350 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ERMP1Q7Z2K6 904 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ZNF358Q9NW07 568 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 FAM198AQ9UFP1 575 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 OR4Q2P0C623 313 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 GDF10P55107 478 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 HMGCS1Q01581 520 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 DPYSL2Q16555 572 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 BAIAP2L2Q6UXY1 529 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 TAC4Q86UU9 113 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 NAXEQ8NCW5 288 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 RAD9AQ99638 391 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 BEX2Q9BXY8 128 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 BEX1Q9HBH7 125 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 DNAJC27Q9NZQ0 273 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 PCDHB14Q9Y5E9 798 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 CREB1P16220 341 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 FPR1P21462 350 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 DGKGP49619 791 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 CHRFAM7AQ494W8 412 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 TMEM69Q5SWH9 247 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ZNF584Q8IVC4 421 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 NAT8LQ8N9F0 302 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ZSCAN1Q8NBB4 408 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ZNF675Q8TD23 568 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ZFAND2BQ8WV99 257 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 HNRNPABQ99729 332 aaKnown RBP13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ZDHHC3Q9NYG2 299 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 PIGBOS1A0A0B4J2F0 54 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 BLOC1S5-TXNDC5H3BN57 136 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 RNF225M0QZC1 329 aaPredicted RBP13.56□□□□□ -0.24
COL4A3-202ENST00000396578 SOX14O95416 240 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 IFNA1P01562 189 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 CHRM1P11229 460 aaPredicted RBP13.56□□□□□ -0.24
COL4A3-202ENST00000396578 RBMXP38159 391 aaKnown RBP13.56□□□□□ -0.24
COL4A3-202ENST00000396578 EPGNQ6UW88 154 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 FAM86B1Q8N7N1 296 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 C1orf127Q8N9H9 656 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 RPLP0P6Q8NHW5 317 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ASB15Q8WXK1 588 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 OR2AG1Q9H205 316 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 CHMP24386 653 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 CTBP2P56545 445 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 CAMKVQ8NCB2 501 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 OR14K1Q8NGZ2 314 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 CMKLR1Q99788 373 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ATG5Q9H1Y0 275 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 NIPSNAP2O75323 286 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 JUNP05412 331 aaKnown RBP13.56□□□□□ -0.24
COL4A3-202ENST00000396578 THEGLP0DJG4 465 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 GSK3BP49841 420 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 GPR33Q49SQ1 333 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ARSJQ5FYB0 599 aaPredicted RBP13.56□□□□□ -0.24
COL4A3-202ENST00000396578 OR4F3Q6IEY1 312 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 ARL14Q8N4G2 192 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 PLA2G15Q8NCC3 412 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 OR56A1Q8NGH5 318 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 TBC1D15Q8TC07 691 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 FAXDC2Q96IV6 333 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 BRF2Q9HAW0 419 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 CDC14AQ9UNH5 594 aa13.56□□□□□ -0.24
COL4A3-202ENST00000396578 RPH3AQ9Y2J0 694 aaPredicted RBP13.56□□□□□ -0.24
COL4A3-202ENST00000396578 F5H0A9 414 aaPredicted RBP13.55□□□□□ -0.24
COL4A3-202ENST00000396578 CAPN5O15484 640 aaPredicted RBP13.55□□□□□ -0.24
COL4A3-202ENST00000396578 SSX4O60224 188 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 ZNF792Q3KQV3 632 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 Q8N402 240 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 NEIL3Q8TAT5 605 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 GNPDA2Q8TDQ7 276 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 FBXL20Q96IG2 436 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 DPYSL5Q9BPU6 564 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 MRIQ9BWK5 157 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms