RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 ST13P50502 369 aaKnown RBP17.27■□□□□ 0.36
FXN-203ENST00000396366 SRSF11Q05519 484 aaKnown RBP17.27■□□□□ 0.36
FXN-203ENST00000396366 C2orf54Q08AI8 447 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 CSHL1Q14406 222 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 TSNQ15631 228 aaKnown RBP17.27■□□□□ 0.36
FXN-203ENST00000396366 CPEB2Q7Z5Q1 589 aaKnown RBP17.27■□□□□ 0.36
FXN-203ENST00000396366 ANKRD37Q7Z713 158 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 AFAP1L2Q8N4X5 818 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 SPATA4Q8NEY3 305 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 ATL1Q8WXF7 558 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 ERP44Q9BS26 406 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 TUBB6Q9BUF5 446 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 SARGQ9BW04 601 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 CAB39LQ9H9S4 337 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 SAYSD1Q9NPB0 183 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 PLEKHB1Q9UF11 243 aaPredicted RBP17.27■□□□□ 0.36
FXN-203ENST00000396366 A8MUI8 341 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 E2F3O00716 465 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 PCDH17O14917 1159 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 GALR3O60755 368 aaPredicted RBP17.26■□□□□ 0.35
FXN-203ENST00000396366 WDPCPO95876 746 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 UQCRHP07919 91 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 ZNF888P0CJ79 500 aaPredicted RBP17.26■□□□□ 0.35
FXN-203ENST00000396366 HNF4AP41235 474 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 GDF5P43026 501 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 SCTRP47872 440 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 TNFSF10P50591 281 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 CBLBQ13191 982 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 ELOAQ14241 798 aaKnown RBP17.26■□□□□ 0.35
FXN-203ENST00000396366 DEFB134Q4QY38 66 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 FCRLBQ6BAA4 426 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 RIPOR1Q6ZS17 1223 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 NKAPQ8N5F7 415 aaKnown RBP17.26■□□□□ 0.35
FXN-203ENST00000396366 ANKRD53Q8N9V6 530 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 PYROXD1Q8WU10 500 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 FAR1Q8WVX9 515 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 HAS2Q92819 552 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 VPS39Q96JC1 886 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 MAGEB10Q96LZ2 347 aaPredicted RBP17.26■□□□□ 0.35
FXN-203ENST00000396366 RHOJQ9H4E5 214 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 KLHL31Q9H511 634 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 GPAMQ9HCL2 828 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 LANCL2Q9NS86 450 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 GRHL1Q9NZI5 618 aa17.26■□□□□ 0.35
FXN-203ENST00000396366 SVILO95425 2214 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 DYTNA2CJ06 578 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 CHST10O43529 356 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 RHAGQ02094 409 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 HYAL2Q12891 473 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 PWP1Q13610 501 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 TRADDQ15628 312 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 BTBD16Q32M84 506 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 NXPE4Q6UWF7 544 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 ST6GALNAC3Q8NDV1 305 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 NT5CQ8TCD5 201 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 TSLPQ969D9 159 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 TAAR6Q96RI8 345 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 EGFL8Q99944 293 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 FAM129AQ9BZQ8 928 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 STMN3Q9NZ72 180 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 WHRNQ9P202 907 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 CTNNAL1Q9UBT7 734 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 ZFP69BQ9UJL9 534 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 DYRK1BQ9Y463 629 aa17.25■□□□□ 0.35
FXN-203ENST00000396366 FAM187AA6NFU0 413 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 WIPF3A6NGB9 483 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 NCF1BA6NI72 391 aaPredicted RBP17.24■□□□□ 0.35
FXN-203ENST00000396366 NCF1CA8MVU1 366 aaPredicted RBP17.24■□□□□ 0.35
FXN-203ENST00000396366 WISP3O95389 354 aaPredicted RBP17.24■□□□□ 0.35
FXN-203ENST00000396366 LDLRP01130 860 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 ICAM2P13598 275 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 NCF1P14598 390 aaPredicted RBP17.24■□□□□ 0.35
FXN-203ENST00000396366 ALOX12P18054 663 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 GMPRP36959 345 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 RAB8AP61006 207 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 REEP5Q00765 189 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 ZNF33BQ06732 778 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 HERC3Q15034 1050 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 RBBP5Q15291 538 aaKnown RBP17.24■□□□□ 0.35
FXN-203ENST00000396366 C4orf17Q53FE4 359 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 RPUSD3Q6P087 351 aaKnown RBP17.24■□□□□ 0.35
FXN-203ENST00000396366 TMPRSS11BQ86T26 416 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 BBOF1Q8ND07 529 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 UTP15Q8TED0 518 aaKnown RBP17.24■□□□□ 0.35
FXN-203ENST00000396366 ANKRD7Q92527 254 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 AICDAQ9GZX7 198 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.24■□□□□ 0.35
FXN-203ENST00000396366 PELI2Q9HAT8 420 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 OARD1Q9Y530 152 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.24■□□□□ 0.35
FXN-203ENST00000396366 POLEQ07864 2286 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 ZGRF1Q86YA3 2104 aa17.24■□□□□ 0.35
FXN-203ENST00000396366 CENPEQ02224 2701 aa17.23■□□□□ 0.35
FXN-203ENST00000396366 DOPEY1Q5JWR5 2465 aa17.23■□□□□ 0.35
FXN-203ENST00000396366 C4orf51C9J302 202 aa17.23■□□□□ 0.35
FXN-203ENST00000396366 PHGDHO43175 533 aaKnown RBP17.23■□□□□ 0.35
FXN-203ENST00000396366 MAN1A2O60476 641 aa17.23■□□□□ 0.35
FXN-203ENST00000396366 B4GALT2O60909 372 aa17.23■□□□□ 0.35
FXN-203ENST00000396366 COL8A1P27658 744 aa17.23■□□□□ 0.35
FXN-203ENST00000396366 AHRP35869 848 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms