RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 PYDC1Q8WXC3 89 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 ZUFSPQ96AP4 578 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 NT5DC2Q9H857 520 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 RXFP3Q9NSD7 469 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 DNAAF2Q9NVR5 837 aaKnown RBP18.51■□□□□ 0.55
LMNB1-202ENST00000395354 A6NCN8 305 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 CDX4O14627 284 aaPredicted RBP18.5■□□□□ 0.55
LMNB1-202ENST00000395354 ZNF883P0CG24 379 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 GIMD1P0DJR0 217 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 F3P13726 295 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 TCN1P20061 433 aaPredicted RBP18.5■□□□□ 0.55
LMNB1-202ENST00000395354 RAB28P51157 221 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 CLCA4Q14CN2 919 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 SUZ12Q15022 739 aaKnown RBP18.5■□□□□ 0.55
LMNB1-202ENST00000395354 MAPKAPK3Q16644 382 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 SPANXN4Q5MJ08 99 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 NANOGP8Q6NSW7 305 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 GALNT18Q6P9A2 607 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 PRR23CQ6ZRP0 262 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 ASCL5Q7RTU5 278 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 KRTCAP2Q8N6L1 136 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 HIPK4Q8NE63 616 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 OR8J3Q8NGG0 315 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 OR2L8Q8NGY9 312 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 DUS3LQ96G46 650 aaKnown RBP18.5■□□□□ 0.55
LMNB1-202ENST00000395354 TMEM74Q96NL1 305 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 TRIM15Q9C019 465 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 NANOGQ9H9S0 305 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 DMRT3Q9NQL9 472 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 IMP3Q9NV31 184 aaKnown RBP18.5■□□□□ 0.55
LMNB1-202ENST00000395354 SCHIP1Q9P0W5 487 aaPredicted RBP18.5■□□□□ 0.55
LMNB1-202ENST00000395354 AP3M1Q9Y2T2 418 aa18.5■□□□□ 0.55
LMNB1-202ENST00000395354 GOLGA4Q13439 2230 aaKnown RBP18.5■□□□□ 0.55
LMNB1-202ENST00000395354 LAMA1P25391 3075 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 TRBV23OR9-2A0A075B6M9 112 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 A0A1W2PPV9 198 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 H3BNX3 289 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 FOXD2O60548 495 aaPredicted RBP18.49■□□□□ 0.55
LMNB1-202ENST00000395354 C8BP07358 591 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 MTHFD1P11586 935 aaKnown RBP18.49■□□□□ 0.55
LMNB1-202ENST00000395354 CDH1P12830 882 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 NDUFS1P28331 727 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 PKLRP30613 574 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 S100A3P33764 101 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 MSX2P35548 267 aaPredicted RBP18.49■□□□□ 0.55
LMNB1-202ENST00000395354 ASMTP46597 345 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 RPS13P62277 151 aaKnown RBP18.49■□□□□ 0.55
LMNB1-202ENST00000395354 KRT33BQ14525 404 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 RPE65Q16518 533 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 C6orf10Q5SRN2 563 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 DUS1LQ6P1R4 473 aaKnown RBP18.49■□□□□ 0.55
LMNB1-202ENST00000395354 IYDQ6PHW0 289 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 KIAA2013Q8IYS2 634 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 RNF175Q8N4F7 328 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 GOLM1Q8NBJ4 401 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 FAM156AQ8NDB6 213 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 DNAJB14Q8TBM8 379 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 ZDHHC1Q8WTX9 485 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 GTF2H4Q92759 462 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 SH3KBP1Q96B97 665 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 TSSK3Q96PN8 268 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 CGREF1Q99674 301 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 AIF1LQ9BQI0 150 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 EDEM2Q9BV94 578 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 RMND5AQ9H871 391 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 TMEM9BQ9NQ34 198 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 MAN2B2Q9Y2E5 1009 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 C15orf41Q9Y2V0 281 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 COLEC10Q9Y6Z7 277 aa18.49■□□□□ 0.55
LMNB1-202ENST00000395354 OR5K4A6NMS3 321 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 B4DGG1 531 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 BAG2O95816 211 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 TACR1P25103 407 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 ERFP50548 548 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 CCR8P51685 355 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 SESN3P58005 492 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 SRSF11Q05519 484 aaKnown RBP18.48■□□□□ 0.55
LMNB1-202ENST00000395354 AASDHQ4L235 1098 aaPredicted RBP18.48■□□□□ 0.55
LMNB1-202ENST00000395354 IRAK1BP1Q5VVH5 260 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 TMIGD1Q6UXZ0 262 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 DHFR2Q86XF0 187 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 SFTPA2Q8IWL1 248 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 NAGSQ8N159 534 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 OR4K1Q8NGD4 311 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 OR52E6Q96RD3 313 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 SH3GL1Q99961 368 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 RHBGQ9H310 441 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 KIR3DX1Q9H7L2 352 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 NLGN3Q9NZ94 848 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 C6orf203Q9P0P8 240 aaPredicted RBP18.48■□□□□ 0.55
LMNB1-202ENST00000395354 TAC3Q9UHF0 121 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 LRRC42Q9Y546 428 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 PCDHGB2Q9Y5G2 931 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 FAM186AA6NE01 2351 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 DNAH14Q0VDD8 3507 aa18.48■□□□□ 0.55
LMNB1-202ENST00000395354 OR52A4PA6NMU1 304 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 ERN1O75460 977 aaKnown RBP18.47■□□□□ 0.55
LMNB1-202ENST00000395354 ETHE1O95571 254 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 ALPPL2P10696 532 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 PTX3P26022 381 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms