RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 PTPN2P17706 415 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 CR2P20023 1033 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 RFX2P48378 723 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 GATMP50440 423 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 CLCN4P51793 760 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 ITGA1P56199 1179 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 KCNJ10P78508 379 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 CYP4F8P98187 520 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 CHIT1Q13231 466 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 GAB1Q13480 694 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 DGKKQ5KSL6 1271 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 PTCHD4Q6ZW05 846 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 ZNF438Q7Z4V0 828 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 PLPP6Q8IY26 295 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 DTX3Q8N9I9 347 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 CHAC2Q8WUX2 184 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 VPS35Q96QK1 796 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 BARHL1Q9BZE3 327 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 ZFYVE1Q9HBF4 777 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 CCDC177Q9NQR7 707 aaPredicted RBP13.8□□□□□ -0.2
CLIP2-203ENST00000395060 MAP4K5Q9Y4K4 846 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 OR6C70A6NIJ9 312 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 SMAD6O43541 496 aaKnown RBP13.79□□□□□ -0.2
CLIP2-203ENST00000395060 EIF2S1P05198 315 aaKnown RBP13.79□□□□□ -0.2
CLIP2-203ENST00000395060 SDHBP21912 280 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 CORO1AP31146 461 aaKnown RBP13.79□□□□□ -0.2
CLIP2-203ENST00000395060 NFATC2Q13469 925 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 NFE2L1Q14494 772 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 TMPRSS11AQ6ZMR5 421 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 CBLL1Q75N03 491 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 HMGN2P46Q86SG4 172 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 C7orf34Q96L11 122 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 COL21A1Q96P44 957 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 GFM1Q96RP9 751 aaKnown RBP13.79□□□□□ -0.2
CLIP2-203ENST00000395060 MAGEH1Q9H213 219 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 LINC00597Q9H2U6 94 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 SMURF1Q9HCE7 757 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 FNIP2Q9P278 1114 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 GNG14A0A1W2PPG7 69 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 MYCP01106 439 aaPredicted RBP13.79□□□□□ -0.2
CLIP2-203ENST00000395060 UGT2B10P36537 528 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 HTR2BP41595 481 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 GPLD1P80108 840 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 GALK2Q01415 458 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 CSTF3Q12996 717 aaKnown RBP13.79□□□□□ -0.2
CLIP2-203ENST00000395060 STARD3Q14849 445 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 CDK10Q15131 360 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 IER5LQ5T953 404 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 FAHD1Q6P587 224 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 LINC00299Q6ZSB3 139 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 HS6ST3Q8IZP7 471 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 OR7G1Q8NGA0 311 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 SOCS4Q8WXH5 440 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 USP7Q93009 1102 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 FAM193BQ96PV7 902 aaPredicted RBP13.79□□□□□ -0.2
CLIP2-203ENST00000395060 GPR62Q9BZJ7 368 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 GABARAPL1Q9H0R8 117 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 NDUFAF4Q9P032 175 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 HSPE1-MOB4S4R3N1 261 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 DNAH14Q0VDD8 3507 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 A0A0U1RQF3 1178 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 TMEM88BA6NKF7 163 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 KDELR3O43731 214 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 TPST2O60704 377 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 AOC2O75106 756 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 HOXC8P31273 242 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 CAP1Q01518 475 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 E2F2Q14209 437 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 SSX1Q16384 188 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 LIPKQ5VXJ0 399 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 TSEN54Q7Z6J9 526 aaKnown RBP13.79□□□□□ -0.2
CLIP2-203ENST00000395060 RBFAQ8N0V3 343 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 STK40Q8N2I9 435 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 SIGLEC11Q96RL6 698 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 ABT1Q9ULW3 272 aaKnown RBP13.79□□□□□ -0.2
CLIP2-203ENST00000395060 PCDHGB3Q9Y5G1 929 aa13.79□□□□□ -0.2
CLIP2-203ENST00000395060 PCM1Q15154 2024 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 TNFRSF10AO00220 468 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 AP2A2O94973 939 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 SLITRK5O94991 958 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 ITGALP20701 1170 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 NFE2Q16621 373 aaPredicted RBP13.78□□□□□ -0.2
CLIP2-203ENST00000395060 CEP78Q5JTW2 689 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 TUBA3EQ6PEY2 450 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 TMIGD1Q6UXZ0 262 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 WDR53Q7Z5U6 358 aaPredicted RBP13.78□□□□□ -0.2
CLIP2-203ENST00000395060 MEX3DQ86XN8 651 aaKnown RBP13.78□□□□□ -0.2
CLIP2-203ENST00000395060 FCGR1BQ92637 280 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 FAM129BQ96TA1 746 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 PKP4Q99569 1192 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 ZNF556Q9HAH1 456 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 MKLN1Q9UL63 735 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 YARS2Q9Y2Z4 477 aaKnown RBP13.78□□□□□ -0.2
CLIP2-203ENST00000395060 CLCA3PQ9Y6N3 262 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 CCDC88CQ9P219 2028 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 ZSCAN5BA6NJL1 495 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 RGS13O14921 159 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 AKR7A2O43488 359 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 TMCC2O75069 709 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 F11P03951 625 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms