RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 RANBP9Q96S59 729 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 LHPPQ9H008 270 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 ABCG4Q9H172 646 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 TRPV4Q9HBA0 871 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 MKKSQ9NPJ1 570 aaPredicted RBP16.67■□□□□ 0.26
SIN3A-203ENST00000394949 CD84Q9UIB8 345 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 SLC45A1Q9Y2W3 748 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 PCDHGA7Q9Y5G6 932 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 FAM170BA6NMN3 283 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 J3KR12 359 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 BCHEP06276 602 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 CSNK2A2P19784 350 aaPredicted RBP16.67■□□□□ 0.26
SIN3A-203ENST00000394949 HOXD12P35452 270 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 AP2S1P53680 142 aaPredicted RBP16.67■□□□□ 0.26
SIN3A-203ENST00000394949 PIGFQ07326 219 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 NXPE1Q8N323 547 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 C2orf73Q8N5S3 287 aaPredicted RBP16.67■□□□□ 0.26
SIN3A-203ENST00000394949 FBXO27Q8NI29 283 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 THAP6Q8TBB0 222 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 BRI3BPQ8WY22 251 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 C11orf84Q9BUA3 381 aaPredicted RBP16.67■□□□□ 0.26
SIN3A-203ENST00000394949 C14orf119Q9NWQ9 140 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 DNAJC27Q9NZQ0 273 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 MGAT4AQ9UM21 535 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 MRPS17Q9Y2R5 130 aaKnown RBP16.67■□□□□ 0.26
SIN3A-203ENST00000394949 ANKRD66B4E2M5 251 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 CLDN4O14493 209 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 KIAA0513O60268 411 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 RPL17P18621 184 aaKnown RBP16.67■□□□□ 0.26
SIN3A-203ENST00000394949 APLP1P51693 650 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 NCBP2P52298 156 aaKnown RBP eCLIP16.67■□□□□ 0.26
SIN3A-203ENST00000394949 TBX5Q99593 518 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 TSSK6Q9BXA6 273 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 RAB11FIP5Q9BXF6 653 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 NSUN3Q9H649 340 aaKnown RBP16.67■□□□□ 0.26
SIN3A-203ENST00000394949 SLA2Q9H6Q3 261 aa16.67■□□□□ 0.26
SIN3A-203ENST00000394949 KCNE1P15382 129 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 GGT5P36269 586 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 PSMA6P60900 246 aaKnown RBP16.66■□□□□ 0.26
SIN3A-203ENST00000394949 LAPTM4AQ15012 233 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 PLA2G4EQ3MJ16 856 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 PRSS55Q6UWB4 352 aaPredicted RBP16.66■□□□□ 0.26
SIN3A-203ENST00000394949 ZFAND4Q86XD8 727 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 PIAS4Q8N2W9 510 aaPredicted RBP16.66■□□□□ 0.26
SIN3A-203ENST00000394949 TCEANCQ8N8B7 351 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 COX18Q8N8Q8 333 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 TMIGD2Q96BF3 282 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 HYLS1Q96M11 299 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 SCGB3A2Q96PL1 93 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 EXO5Q9H790 373 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 SRRDQ9UH36 339 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 SLC22A14Q9Y267 594 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 KRBA1A5PL33 1030 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 NFKBIEO00221 500 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 CAPN5O15484 640 aaPredicted RBP16.66■□□□□ 0.26
SIN3A-203ENST00000394949 PRKYO43930 277 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 KRT33AO76009 404 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 MS4A2Q01362 244 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 TRAM1Q15629 374 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 REEP3Q6NUK4 255 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 SPERTQ8NA61 448 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 LSM14AQ8ND56 463 aaKnown RBP16.66■□□□□ 0.26
SIN3A-203ENST00000394949 OR10Q1Q8NGQ4 319 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 TRIB3Q96RU7 358 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 DOHHQ9BU89 302 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 XYLT2Q9H1B5 865 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 RNF11Q9Y3C5 154 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 C5orf51A6NDU8 294 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 FZD9O00144 591 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 NUAK1O60285 661 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 RP2O75695 350 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 PRH1P02810 166 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 GGT1P19440 569 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 KDELR2P33947 212 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 CEACAM20Q6UY09 585 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 CEP68Q76N32 757 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 MFSD2AQ8NA29 543 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 HERVK_113Q902F9 699 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 THRSPQ92748 146 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 SUSD3Q96L08 255 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 RIPOR3Q96MK2 946 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 WRAP53Q9BUR4 548 aaKnown RBP16.66■□□□□ 0.26
SIN3A-203ENST00000394949 CTPS2Q9NRF8 586 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 C12orf71A8MTZ7 269 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 DDX6P26196 483 aaKnown RBP eCLIP16.66■□□□□ 0.265e-6■■■■■ 46.6
SIN3A-203ENST00000394949 AVPR1BP47901 424 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 OR4D2P58180 307 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 KCNC3Q14003 757 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 FAAH2Q6GMR7 532 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 WDTC1Q8N5D0 677 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 SNIP1Q8TAD8 396 aaKnown RBP16.66■□□□□ 0.26
SIN3A-203ENST00000394949 TFAP2CQ92754 450 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 KXD1Q9BQD3 176 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 HPF1Q9NWY4 346 aa16.66■□□□□ 0.26
SIN3A-203ENST00000394949 RB1P06400 928 aa16.65■□□□□ 0.26
SIN3A-203ENST00000394949 NRIP1P48552 1158 aa16.65■□□□□ 0.26
SIN3A-203ENST00000394949 RABGGTBP53611 331 aa16.65■□□□□ 0.26
SIN3A-203ENST00000394949 Q8N402 240 aa16.65■□□□□ 0.26
SIN3A-203ENST00000394949 TTYH2Q9BSA4 534 aa16.65■□□□□ 0.26
SIN3A-203ENST00000394949 TMEM248Q9NWD8 314 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms