RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 EXOSC8Q96B26 276 aaKnown RBP12.77□□□□□ -0.37
NFKB1-202ENST00000394820 MBOAT4Q96T53 435 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 MGLLQ99685 303 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 CREBZFQ9NS37 354 aa12.77□□□□□ -0.37
NFKB1-202ENST00000394820 H3BSH0 61 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 ERN1O75460 977 aaKnown RBP12.76□□□□□ -0.37
NFKB1-202ENST00000394820 SULT1C4O75897 302 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 ITIH1P19827 911 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 CDH24Q86UP0 819 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 BBS7Q8IWZ6 715 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 C10orf111Q8N326 155 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 METTL4Q8N3J2 472 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 ZNF548Q8NEK5 533 aaPredicted RBP12.76□□□□□ -0.37
NFKB1-202ENST00000394820 GANCQ8TET4 914 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 RNFT2Q96EX2 444 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 CD244Q9BZW8 370 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 C8orf4Q9NR00 106 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 TAS2R9Q9NYW1 312 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 SLC25A37Q9NYZ2 338 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 H2AFY2Q9P0M6 372 aaPredicted RBP12.76□□□□□ -0.37
NFKB1-202ENST00000394820 CFAP97Q9P2B7 532 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 SSR3Q9UNL2 185 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 A0A1W2PQ72 361 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 TMEM221A6NGB7 291 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 KDELR3O43731 214 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 TLX2O43763 284 aaPredicted RBP12.76□□□□□ -0.37
NFKB1-202ENST00000394820 URODP06132 367 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 MYL12AP19105 171 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 CA5AP35218 305 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 ARF5P84085 180 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 SELENBP1Q13228 472 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 NOGQ13253 232 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 EXOC3L2Q2M3D2 409 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 VMACQ2NL98 169 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 CTSL3PQ5NE16 218 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 NOXRED1Q6NXP6 359 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 PAMR1Q6UXH9 720 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 SERPINA13PQ6UXR4 307 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 USP43Q70EL4 1123 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 OLIG3Q7RTU3 272 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 VN1R5Q7Z5H4 357 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 NAGSQ8N159 534 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 TEX26Q8N6G2 289 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 ZNF486Q96H40 463 aaPredicted RBP12.76□□□□□ -0.37
NFKB1-202ENST00000394820 ZDHHC4Q9NPG8 344 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 IL1RAPQ9NPH3 570 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 PLSCR3Q9NRY6 295 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 DNAJC11Q9NVH1 559 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 TMED5Q9Y3A6 229 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 SCN10AQ9Y5Y9 1956 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 DNAH14Q0VDD8 3507 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 IGLV3-10A0A075B6K4 115 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 TCRBV5S2A0A599 114 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 PCDHGA12O60330 932 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 PRLP01236 227 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 GSTM5P46439 218 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 MC1RQ01726 317 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 TARDBPQ13148 414 aaKnown RBP eCLIP12.76□□□□□ -0.37
NFKB1-202ENST00000394820 ACOX1Q15067 660 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 OXA1LQ15070 435 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 FRG2Q64ET8 278 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 LRRC66Q68CR7 880 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 TTC23LQ6PF05 361 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 PARP16Q8N5Y8 322 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 C17orf50Q8WW18 174 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 NEDD4LQ96PU5 975 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 FRG2BQ96QU4 278 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 WRAP53Q9BUR4 548 aaKnown RBP12.76□□□□□ -0.37
NFKB1-202ENST00000394820 LINC00597Q9H2U6 94 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 TRIM45Q9H8W5 580 aaPredicted RBP12.76□□□□□ -0.37
NFKB1-202ENST00000394820 GPSM3Q9Y4H4 160 aa12.76□□□□□ -0.37
NFKB1-202ENST00000394820 SMLR1H3BR10 107 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 OR7A17O14581 309 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 CCNDBP1O95273 360 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 ACRP10323 421 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 SERPINA4P29622 427 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 CSNK2BP67870 215 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 ABHD18Q0P651 414 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 KRR1Q13601 381 aaKnown RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 DPY19L1Q2PZI1 675 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 SETMARQ53H47 684 aaPredicted RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 TRIM69Q86WT6 500 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 ZZZ3Q8IYH5 903 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 BPIFB1Q8TDL5 484 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 KCNJ9Q92806 393 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 MUL1Q969V5 352 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 OR5M11Q96RB7 305 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 SLC30A2Q9BRI3 323 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 WACQ9BTA9 647 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 MTG2Q9H4K7 406 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 DCAF13Q9NV06 445 aaKnown RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 LSM7Q9UK45 103 aaKnown RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 RIMKLBQ9ULI2 386 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 DHRS7Q9Y394 339 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 PCDHGB6Q9Y5F9 930 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 ZSCAN5BA6NJL1 495 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 STX16O14662 325 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 PRSS23O95084 383 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 C6orf47O95873 294 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms