RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TRIM4Q9C037 500 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 SLC26A1Q9H2B4 701 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 ADNPQ9H2P0 1102 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 KLHL31Q9H511 634 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 CPSF2Q9P2I0 782 aaKnown RBP7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 XPR1Q9UBH6 696 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 C3orf18Q9UK00 162 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 FBXL4Q9UKA2 621 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 PTBP2Q9UKA9 531 aaKnown RBP7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 CDC14AQ9UNH5 594 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 NAALAD2Q9Y3Q0 740 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 HS3ST3B1Q9Y662 390 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 KCNE2Q9Y6J6 123 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 IKBKGQ9Y6K9 419 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 FER1L5A0AVI2 2057 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 IGLV3-12A0A075B6K2 115 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 IGHV3-20A0A0C4DH32 117 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 SMIM23A6NLE4 172 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 IDSB3KWA1 339 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 MKRN2OSH3BPM6 223 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 GOLGA8RI6L899 631 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 AGPSO00116 658 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 PEX12O00623 359 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 TXNDC9O14530 226 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 CLGNO14967 610 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 SLC28A2O43868 658 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 SH3BGRLO75368 114 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 IPO13O94829 963 aaKnown RBP7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 SIX3O95343 332 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 NSA2O95478 260 aaKnown RBP7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 TBX6O95947 436 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 ALBP02768 609 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 HEXBP07686 556 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 CELA2AP08217 269 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 ABHD2P08910 425 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 C1GALT1C1LP0DN25 315 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 GFAPP14136 432 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 MMP11P24347 488 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 HNRNPH1P31943 449 aaKnown RBP7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 GGT5P36269 586 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 XCR1P46094 333 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 SLCO1A2P46721 670 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 SERPINB9P50453 376 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 VSNL1P62760 191 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 LSM11P83369 360 aaKnown RBP eCLIP7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 RGS1Q08116 209 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 CHIT1Q13231 466 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 FAM53BQ14153 422 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 DOC2AQ14183 400 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 RBBP7Q16576 425 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 NDUFA9Q16795 377 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 PFKFB4Q16877 469 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 MINDY4Q4G0A6 757 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 XKR6Q5GH73 641 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 TECRLQ5HYJ1 363 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 DCAF10Q5QP82 559 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 MFSD4BQ5TF39 518 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 KIRREL2Q6UWL6 708 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 TMIGD1Q6UXZ0 262 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 ASB18Q6ZVZ8 466 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 RPS27LQ71UM5 84 aaKnown RBP7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 TRMT10CQ7L0Y3 403 aaKnown RBP7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 TAOK1Q7L7X3 1001 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 VN1R5Q7Z5H4 357 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 PARP9Q8IXQ6 854 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 RNF175Q8N4F7 328 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 TEX9Q8N6V9 391 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 OR51Q1Q8NH59 317 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 NT5CQ8TCD5 201 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 UTP15Q8TED0 518 aaKnown RBP7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 CREB3L4Q8TEY5 395 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 UBLCP1Q8WVY7 318 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 ISL2Q96A47 359 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 THAP11Q96EK4 314 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 MVB12AQ96EY5 273 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 PEX11GQ96HA9 241 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 SCYL1Q96KG9 808 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 SLC25A23Q9BV35 468 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 SARGQ9BW04 601 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 CD244Q9BZW8 370 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 FAM117AQ9C073 453 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 CNOT10Q9H9A5 744 aaKnown RBP7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 ANKHQ9HCJ1 492 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 LUZP4Q9P127 313 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 TBK1Q9UHD2 729 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZFP69BQ9UJL9 534 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 TUBD1Q9UJT1 453 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZNF180Q9UJW8 692 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 MKL2Q9ULH7 1088 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 MAP4K5Q9Y4K4 846 aa7.26□□□□□ -1.25
HMGB3P1-201ENST00000393368 ESPNB1AK53 854 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 B8ZZF3 427 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 K7EPI3 171 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 MAP2K7O14733 419 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 PRPF4O43172 522 aaKnown RBP eCLIP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZNF500O60304 480 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 GALR3O60755 368 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 H2AFYO75367 372 aaKnown RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 KRT38O76015 456 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 BMP10O95393 424 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms