RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 MRPS21P82921 87 aaKnown RBP12.64□□□□□ -0.39
PTPRN2-202ENST00000389416 DEFB110Q30KQ9 67 aa12.64□□□□□ -0.39
PTPRN2-202ENST00000389416 PDCD4Q53EL6 469 aaKnown RBP12.64□□□□□ -0.39
PTPRN2-202ENST00000389416 CATSPEREQ5SY80 951 aa12.64□□□□□ -0.39
PTPRN2-202ENST00000389416 MANEALQ5VSG8 457 aa12.64□□□□□ -0.39
PTPRN2-202ENST00000389416 ALKBH2Q6NS38 261 aa12.64□□□□□ -0.39
PTPRN2-202ENST00000389416 UNC5DQ6UXZ4 953 aa12.64□□□□□ -0.39
PTPRN2-202ENST00000389416 NXPE3Q969Y0 559 aa12.64□□□□□ -0.39
PTPRN2-202ENST00000389416 PRR11Q96HE9 360 aaPredicted RBP12.64□□□□□ -0.39
PTPRN2-202ENST00000389416 C6orf62Q9GZU0 229 aaPredicted RBP12.64□□□□□ -0.39
PTPRN2-202ENST00000389416 NEUROD4Q9HD90 331 aa12.64□□□□□ -0.39
PTPRN2-202ENST00000389416 AQP12BA6NM10 295 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 DIRAS1O95057 198 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 HOXC8P31273 242 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 ABATP80404 500 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 SLAMF1Q13291 335 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 ZNF267Q14586 743 aaPredicted RBP12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 ZNF77Q15935 545 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 LETMD1Q6P1Q0 360 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 NEK5Q6P3R8 708 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 TRIM73Q86UV7 250 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 AQP12AQ8IXF9 295 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 MYEOVQ96EZ4 313 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 CAMK1GQ96NX5 476 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 SLC6A17Q9H1V8 727 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 COQ10BQ9H8M1 238 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM221BA6H8Z2 402 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM86C2PA6NEL3 165 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 EIF3FO00303 357 aaPredicted RBP12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 BCKDKO14874 412 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 IGLV3-25P01717 112 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 IL1RNP18510 177 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 PRDX3P30048 256 aaKnown RBP12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 DEFA1P59665 94 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 DEFA3P59666 94 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 ABHD18Q0P651 414 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 ADGRE1Q14246 886 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM92BQ6ZTR7 304 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 ZFAND4Q86XD8 727 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 NFKBIDQ8NI38 313 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 MYDGFQ969H8 173 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 PRRG4Q9BZD6 226 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 SRP54P61011 504 aaKnown RBP12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 MED22Q15528 200 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM109BQ6ICB4 259 aaPredicted RBP12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 TMEFF1Q8IYR6 380 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 LMNTD1Q8N9Z9 388 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 OR8K5Q8NH50 307 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 ZDHHC1Q8WTX9 485 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 DHRS4Q9BTZ2 278 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 TBL1XR1Q9BZK7 514 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 NCDNQ9UBB6 729 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 PRDM4Q9UKN5 801 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 MKL2Q9ULH7 1088 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 IRAK3Q9Y616 596 aa12.63□□□□□ -0.39
PTPRN2-202ENST00000389416 SCN1AP35498 2009 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 PNMA8CA0A1B0GUJ8 204 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 PRORSD1PA6NEY8 169 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 DFNA5O60443 496 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 APBB3O95704 486 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 GCAP28676 217 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 SLC7A1P30825 629 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 CCKBRP32239 447 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 RNF130Q86XS8 419 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 RASGEF1AQ8N9B8 481 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 OR4K14Q8NGD5 310 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 PTCHD1Q96NR3 888 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 MYADMQ96S97 322 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 UHRF1Q96T88 793 aaPredicted RBP12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 PDLIM1O00151 329 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 MGRN1O60291 552 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 CCNB2O95067 398 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 JMJD7P0C870 316 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 XKP51811 444 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 RPA4Q13156 261 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 NANOGP8Q6NSW7 305 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 GPR153Q6NV75 609 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 IQCHQ86VS3 1027 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 CSNK1A1LQ8N752 337 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 SMPDL3BQ92485 455 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 FBXL8Q96CD0 374 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 RMI1Q9H9A7 625 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 NANOGQ9H9S0 305 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 CLK4Q9HAZ1 481 aaKnown RBP12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 FARSBQ9NSD9 589 aaKnown RBP12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 AIG1Q9NVV5 245 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 GIN1Q9NXP7 522 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 ALKBH4Q9NXW9 302 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 INTS6Q9UL03 887 aaKnown RBP12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 MROH6A6NGR9 719 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM25AB3EWG3 89 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM25CB3EWG5 89 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM25GB3EWG6 89 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 EI24O14681 340 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 DUX1O43812 170 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 PSMA3P25788 255 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 KCNC1P48547 511 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 FOXA1P55317 472 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms