RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 NKAIN1Q4KMZ8 207 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 TMEM35AQ53FP2 167 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 BROXQ5VW32 411 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 ZNF385CQ66K41 422 aaPredicted RBP16.82■□□□□ 0.28
CD9-202ENST00000382515 C10orf107Q8IVU9 208 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 TRPC4APQ8TEL6 797 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 MR1Q95460 341 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 CENPKQ9BS16 269 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 SLC6A16Q9GZN6 736 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 SEMA4BQ9NPR2 832 aaPredicted RBP16.82■□□□□ 0.28
CD9-202ENST00000382515 SLC17A7Q9P2U7 560 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 TRPS1Q9UHF7 1281 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 SNX6Q9UNH7 406 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 PCDHGA6Q9Y5G7 932 aa16.82■□□□□ 0.28
CD9-202ENST00000382515 ASPMQ8IZT6 3477 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 ANKRD12Q6UB98 2062 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 LRIT2A6NDA9 550 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 HMGB1P1B2RPK0 211 aaPredicted RBP16.81■□□□□ 0.28
CD9-202ENST00000382515 C9J4A7 227 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 NPHS1O60500 1241 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 NSA2O95478 260 aaKnown RBP16.81■□□□□ 0.28
CD9-202ENST00000382515 ESRRBO95718 433 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 ENO1P06733 434 aaKnown RBP16.81■□□□□ 0.28
CD9-202ENST00000382515 CTSBP07858 339 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 CD22P20273 847 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 IL10P22301 178 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 PTX3P26022 381 aaPredicted RBP16.81■□□□□ 0.28
CD9-202ENST00000382515 ARL1P40616 181 aaPredicted RBP16.81■□□□□ 0.28
CD9-202ENST00000382515 CDH13P55290 713 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 PCLAFQ15004 111 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 RBBP7Q16576 425 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 HKDC1Q2TB90 917 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 PRAMEF17Q5VTA0 474 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 MYLK4Q86YV6 388 aaPredicted RBP16.81■□□□□ 0.28
CD9-202ENST00000382515 NUDCD3Q8IVD9 361 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 AFAP1L2Q8N4X5 818 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 CCNYL1Q8N7R7 359 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 OR52B6Q8NGF0 335 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 ZNF473Q8WTR7 871 aaKnown RBP16.81■□□□□ 0.28
CD9-202ENST00000382515 FKBP10Q96AY3 582 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 NACC2Q96BF6 587 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 CMTM7Q96FZ5 175 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 ATP6V1G3Q96LB4 118 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 NSUN5Q96P11 429 aaKnown RBP16.81■□□□□ 0.28
CD9-202ENST00000382515 CCNL2Q96S94 520 aaPredicted RBP16.81■□□□□ 0.28
CD9-202ENST00000382515 ROGDIQ9GZN7 287 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 SPNS1Q9H2V7 528 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 EML4Q9HC35 981 aaKnown RBP16.81■□□□□ 0.28
CD9-202ENST00000382515 ANKHQ9HCJ1 492 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 ZNF304Q9HCX3 659 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 STARD5Q9NSY2 213 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 DHCR7Q9UBM7 475 aaKnown RBP16.81■□□□□ 0.28
CD9-202ENST00000382515 NDOR1Q9UHB4 597 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 RNF11Q9Y3C5 154 aa16.81■□□□□ 0.28
CD9-202ENST00000382515 KLK10O43240 276 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 KRT6AP02538 564 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 KRT6BP04259 564 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 SERPIND1P05546 499 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 DHRS4L1P0CG22 281 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 SMIM10L1P0DMW3 83 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 ALOX12P18054 663 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 TCN2P20062 427 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 ALDH3A1P30838 453 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 TSFMP43897 325 aaKnown RBP16.8■□□□□ 0.28
CD9-202ENST00000382515 KRT6CP48668 564 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 MC1RQ01726 317 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 IFT88Q13099 833 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 TRAF3Q13114 568 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 CPSF6Q16630 551 aaKnown RBP eCLIP16.8■□□□□ 0.28
CD9-202ENST00000382515 ADPRMQ3LIE5 342 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 CRTC2Q53ET0 693 aaPredicted RBP16.8■□□□□ 0.28
CD9-202ENST00000382515 FRG2Q64ET8 278 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 TTC19Q6DKK2 380 aaPredicted RBP16.8■□□□□ 0.28
CD9-202ENST00000382515 FRMD7Q6ZUT3 714 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 GPRIN3Q6ZVF9 776 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 OVCH1Q7RTY7 1134 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.8■□□□□ 0.28
CD9-202ENST00000382515 KIRREL3Q8IZU9 778 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 OR4F6Q8NGB9 312 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 SMIM10Q96HG1 83 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 C10orf90Q96M02 699 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 FRG2BQ96QU4 278 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 SLC29A3Q9BZD2 475 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 SLC26A1Q9H2B4 701 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 C12orf65Q9H3J6 166 aaKnown RBP16.8■□□□□ 0.28
CD9-202ENST00000382515 GSTO2Q9H4Y5 243 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 NMRK1Q9NWW6 199 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 NKIRAS1Q9NYS0 192 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 IFT80Q9P2H3 777 aaPredicted RBP16.8■□□□□ 0.28
CD9-202ENST00000382515 GPN3Q9UHW5 284 aaPredicted RBP16.8■□□□□ 0.28
CD9-202ENST00000382515 NXT1Q9UKK6 140 aaKnown RBP16.8■□□□□ 0.28
CD9-202ENST00000382515 FARSAQ9Y285 508 aaKnown RBP16.8■□□□□ 0.28
CD9-202ENST00000382515 PADI2Q9Y2J8 665 aa16.8■□□□□ 0.28
CD9-202ENST00000382515 SEC16AO15027 2179 aa16.79■□□□□ 0.28
CD9-202ENST00000382515 ACACAQ13085 2346 aa16.79■□□□□ 0.28
CD9-202ENST00000382515 URB1O60287 2271 aaKnown RBP16.79■□□□□ 0.28
CD9-202ENST00000382515 TAF4O00268 1085 aa16.79■□□□□ 0.28
CD9-202ENST00000382515 P2RX6O15547 441 aa16.79■□□□□ 0.28
CD9-202ENST00000382515 GRK2P25098 689 aa16.79■□□□□ 0.28
CD9-202ENST00000382515 SERPINB4P48594 390 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms