RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 RNF175Q8N4F7 328 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 NATD1Q8N6N6 113 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 ZNF513Q8N8E2 541 aaPredicted RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 OR5K1Q8NHB7 308 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 OR5K2Q8NHB8 316 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 GOT1L1Q8NHS2 421 aaPredicted RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 CYGBQ8WWM9 190 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 TFGQ92734 400 aaPredicted RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 AURKBQ96GD4 344 aaPredicted RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 RBM4BQ9BQ04 359 aaKnown RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 TRMT61BQ9BVS5 477 aaKnown RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 RBM4Q9BWF3 364 aaKnown RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 PLA2G2FQ9BZM2 168 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 TRIT1Q9H3H1 467 aaKnown RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 REEP4Q9H6H4 257 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 NT5DC2Q9H857 520 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 CAAP1Q9H8G2 361 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 PHPT1Q9NRX4 125 aaPredicted RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 AHSPQ9NZD4 102 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 IFT80Q9P2H3 777 aaPredicted RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 VPS4AQ9UN37 437 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 PCDHGB4Q9UN71 923 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 DMTF1Q9Y222 760 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 PCDHGB5Q9Y5G0 923 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 DOCK8Q8NF50 2099 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 TRIM64A6NGJ6 449 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 TRIM64CA6NLI5 447 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 GABRR3A8MPY1 467 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 G3V2T6 193 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 SEMA3DO95025 777 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 CPSF4O95639 269 aaKnown RBP10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 ALPLP05186 524 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 THRBP10828 461 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 LAMP1P11279 417 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 PTX3P26022 381 aaPredicted RBP10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 TRIM23P36406 574 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 NBL1P41271 181 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 GSTM5P46439 218 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 ID4P47928 161 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 RXRGP48443 463 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 TAS2R38P59533 333 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 CTBSQ01459 385 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 TSTA3Q13630 321 aaPredicted RBP10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 RBBP5Q15291 538 aaKnown RBP10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 HKDC1Q2TB90 917 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 NADK2Q4G0N4 442 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 PYCR3Q53H96 274 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 CYBRD1Q53TN4 286 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 TTC23Q5W5X9 447 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 NAIF1Q69YI7 327 aaPredicted RBP10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 CES5AQ6NT32 575 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 TMEM214Q6NUQ4 689 aaKnown RBP10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 FAM83HQ6ZRV2 1179 aaPredicted RBP10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 MTSS1LQ765P7 747 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 C17orf64Q86WR6 236 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 HIPK1Q86Z02 1210 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 ZZZ3Q8IYH5 903 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 CLEC4FQ8N1N0 589 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 HDDC3Q8N4P3 179 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 TRIML2Q8N7C3 387 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 CDC26Q8NHZ8 85 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 NETO1Q8TDF5 533 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 FAM131CQ96AQ9 280 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 CHFRQ96EP1 664 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 RIPOR3Q96MK2 946 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 MYADMQ96S97 322 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 KXD1Q9BQD3 176 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 TIMM29Q9BSF4 260 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 C1QTNF7Q9BXJ2 289 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 RAD21L1Q9H4I0 556 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 WDR26Q9H7D7 661 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 CARS2Q9HA77 564 aaKnown RBP10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 TPT1P8Q9HAU6 139 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 VCX3AQ9NNX9 186 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 WASH6PQ9NQA3 447 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 AASDHPPTQ9NRN7 309 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 CIDEBQ9UHD4 219 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 TMEM98Q9Y2Y6 226 aa10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 TPRP12270 2363 aaKnown RBP10.06□□□□□ -0.8
POLR2J3-201ENST00000379340 PLOD2O00469 737 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 KCNK5O95279 499 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 MT-ND1P03886 318 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 SLC35G4P0C7Q5 338 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 MYCLP1P12525 358 aaPredicted RBP10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 LAMP2P13473 410 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 ATP6V1B1P15313 513 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 ALDH3B2P48448 385 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 RPS21P63220 83 aaKnown RBP10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 VAC14Q08AM6 782 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 PDE7AQ13946 482 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 TEAD4Q15561 434 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 NKG7Q16617 165 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 ZCCHC8Q6NZY4 707 aaKnown RBP10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 TMIGD1Q6UXZ0 262 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 EIF3MQ7L2H7 374 aaKnown RBP10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 COMMD6Q7Z4G1 85 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 STK32CQ86UX6 486 aa10.05□□□□□ -0.8
POLR2J3-201ENST00000379340 FAM129CQ86XR2 697 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms