RNA–Protein interactions for RNA: ENST00000379316.3

PDCD5-202, Transcript of programmed cell death 5, humanhuman

TSL 1 (best) BASIC

Gene PDCD5, Length 154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-202ENST00000379316 NT5CQ8TCD5 201 aa13.1□□□□□ -0.31
PDCD5-202ENST00000379316 BRIX1Q8TDN6 353 aaKnown RBP13.1□□□□□ -0.31
PDCD5-202ENST00000379316 SSC4DQ8WTU2 575 aa13.1□□□□□ -0.31
PDCD5-202ENST00000379316 HAS2Q92819 552 aa13.1□□□□□ -0.31
PDCD5-202ENST00000379316 C19orf60Q96EN9 201 aa13.1□□□□□ -0.31
PDCD5-202ENST00000379316 SEC16BQ96JE7 1060 aa13.1□□□□□ -0.31
PDCD5-202ENST00000379316 TSNARE1Q96NA8 513 aa13.1□□□□□ -0.31
PDCD5-202ENST00000379316 BARD1Q99728 777 aaKnown RBP13.1□□□□□ -0.31
PDCD5-202ENST00000379316 MACROD1Q9BQ69 325 aa13.1□□□□□ -0.31
PDCD5-202ENST00000379316 RNF32Q9H0A6 362 aa13.1□□□□□ -0.31
PDCD5-202ENST00000379316 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDCD5-202ENST00000379316 LRRK2Q5S007 2527 aa13.1□□□□□ -0.31
PDCD5-202ENST00000379316 SHANK1Q9Y566 2161 aa13.1□□□□□ -0.31
PDCD5-202ENST00000379316 PRRC2CQ9Y520 2896 aaKnown RBP13.09□□□□□ -0.31
PDCD5-202ENST00000379316 TCRBV9S1A1TA0A576 114 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 ANKUB1A6NFN9 424 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 MAGEB17A8MXT2 336 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 FANCGO15287 622 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 GALR3O60755 368 aaPredicted RBP13.09□□□□□ -0.31
PDCD5-202ENST00000379316 RDH16O75452 317 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 STX2P32856 288 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 SOX11P35716 441 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 SCTRP47872 440 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 PGGT1BP53609 377 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 PLTPP55058 493 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 ATP6V0D1P61421 351 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 REEP5Q00765 189 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 MEF2AQ02078 507 aaPredicted RBP13.09□□□□□ -0.31
PDCD5-202ENST00000379316 SRSF1Q07955 248 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDCD5-202ENST00000379316 PCOLCEQ15113 449 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 NSDHLQ15738 373 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 ZXDCQ2QGD7 858 aaPredicted RBP13.09□□□□□ -0.31
PDCD5-202ENST00000379316 CATSPEREQ5SY80 951 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 PLAG1Q6DJT9 500 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 NXPE4Q6UWF7 544 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 SYT10Q6XYQ8 523 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 PRSS41Q7RTY9 318 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 TMPRSS11BQ86T26 416 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 AFAP1L2Q8N4X5 818 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 SIRT6Q8N6T7 355 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 ZNF740Q8NDX6 193 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 IMMP1LQ96LU5 166 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 LPAR4Q99677 370 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 RBBP8Q99708 897 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 MCMBPQ9BTE3 642 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 PITHD1Q9GZP4 211 aaPredicted RBP13.09□□□□□ -0.31
PDCD5-202ENST00000379316 ABI3Q9P2A4 366 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 SLC22A14Q9Y267 594 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 CSAG2Q9Y5P2 127 aa13.09□□□□□ -0.31
PDCD5-202ENST00000379316 PTPN13Q12923 2485 aa13.08□□□□□ -0.31
PDCD5-202ENST00000379316 A0A088AWK7 358 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 BLACEA4D250 179 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 PSMD12O00232 456 aaPredicted RBP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 JRKO75564 520 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 WDR47O94967 919 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 CBX6O95503 412 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 S100BP04271 92 aaPredicted RBP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 CCDC166P0CW27 439 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 ZNF10P21506 573 aaPredicted RBP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 SPRP35270 261 aaPredicted RBP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 STXBP1P61764 594 aaKnown RBP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 ACTN3Q08043 901 aaPredicted RBP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 MRPL49Q13405 166 aaKnown RBP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 NAB1Q13506 487 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 ZNF460Q14592 562 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 RBBP5Q15291 538 aaKnown RBP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 TGFBIQ15582 683 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 TSNQ15631 228 aaKnown RBP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 EIF2S3LQ2VIR3 472 aaKnown RBP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 BTBD16Q32M84 506 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 DEFB134Q4QY38 66 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 GRTP1Q5TC63 336 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 CEP128Q6ZU80 1094 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 CCDC25Q86WR0 208 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 PDSS2Q86YH6 399 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 CEP97Q8IW35 865 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 CTAGE3PQ8IX95 158 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 KLHDC8AQ8IYD2 350 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 KRT78Q8N1N4 520 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 BCORP1Q8N888 145 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 ST6GALNAC3Q8NDV1 305 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 PLPP5Q8NEB5 264 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 OR1N1Q8NGS0 311 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 M1APQ8TC57 530 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 ANKRD49Q8WVL7 239 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 PSMF1Q92530 271 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 TBC1D20Q96BZ9 403 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 RHBDF1Q96CC6 855 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 PEX11GQ96HA9 241 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 PSMG3-AS1Q96PY0 264 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 GPR22Q99680 433 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 MESP1Q9BRJ9 268 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 GPRC5BQ9NZH0 403 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 GRHL1Q9NZI5 618 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 IKZF3Q9UKT9 509 aa13.08□□□□□ -0.32
PDCD5-202ENST00000379316 RP1L1Q8IWN7 2480 aaPredicted RBP13.08□□□□□ -0.32
PDCD5-202ENST00000379316 FAM159BA6NKW6 160 aa13.07□□□□□ -0.32
PDCD5-202ENST00000379316 SEC24DO94855 1032 aaPredicted RBP13.07□□□□□ -0.32
PDCD5-202ENST00000379316 FHP07954 510 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms