RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 NOTCH4Q99466 2003 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 CHD7Q9P2D1 2997 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 TTC34A8MYJ7 566 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 SERPINB7O75635 380 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 GNRH1P01148 92 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 IMPDH2P12268 514 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 LAG3P18627 525 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 CA8P35219 290 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 PCGF2P35227 344 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 ASMTP46597 345 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 GSSP48637 474 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 RPS13P62277 151 aaKnown RBP10.52□□□□□ -0.73
BEST1-201ENST00000378043 SELENOWP63302 87 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 HBA1P69905 142 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 POM121L1PQ3SYA9 428 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 PAGE2BQ5JRK9 111 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 PRSS36Q5K4E3 855 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 SLCO4C1Q6ZQN7 724 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 TECPR1Q7Z6L1 1165 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 RBM12BQ8IXT5 1001 aaKnown RBP10.52□□□□□ -0.73
BEST1-201ENST00000378043 OR6Q1Q8NGQ2 317 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 CYB5D2Q8WUJ1 264 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 TMEM159Q96B96 161 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 LGALS12Q96DT0 336 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 TCEAL4Q96EI5 215 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 KCNC2Q96PR1 638 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 FEVQ99581 238 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 SPATA9Q9BWV2 254 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.52□□□□□ -0.73
BEST1-201ENST00000378043 RLIMQ9NVW2 624 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 RNF6Q9Y252 685 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 PCDHGB3Q9Y5G1 929 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 LYVE1Q9Y5Y7 322 aa10.52□□□□□ -0.73
BEST1-201ENST00000378043 PLXND1Q9Y4D7 1925 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 MYO1DO94832 1006 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 OPN1SWP03999 348 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 GBAP04062 536 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 TYRP14679 529 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 ZNF8P17098 575 aaPredicted RBP10.51□□□□□ -0.73
BEST1-201ENST00000378043 FUT4P22083 530 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 C21orf33P30042 268 aaPredicted RBP10.51□□□□□ -0.73
BEST1-201ENST00000378043 TIA1P31483 386 aaKnown RBP eCLIP10.51□□□□□ -0.73
BEST1-201ENST00000378043 TRIM60Q495X7 471 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 PERM1Q5SV97 790 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 ATL1Q8WXF7 558 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 ITFG2Q969R8 447 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 MRGPRX3Q96LB0 322 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 HEPHQ9BQS7 1158 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 ZSCAN5AQ9BUG6 496 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 WDR12Q9GZL7 423 aaKnown RBP10.51□□□□□ -0.73
BEST1-201ENST00000378043 ZBP1Q9H171 429 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 CCNB1IP1Q9NPC3 277 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 PRDM8Q9NQV8 689 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 TRNAU1APQ9NX07 287 aaKnown RBP10.51□□□□□ -0.73
BEST1-201ENST00000378043 SH3BP4Q9P0V3 963 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 TESMINQ9Y4I5 508 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 GNG14A0A1W2PPG7 69 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 TMEM247A6NEH6 219 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 MGAT4DA6NG13 374 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 RNASET2O00584 256 aaKnown RBP10.51□□□□□ -0.73
BEST1-201ENST00000378043 CCL16O15467 120 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 MRPS14O60783 128 aaKnown RBP10.51□□□□□ -0.73
BEST1-201ENST00000378043 ADAM23O75077 832 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 TNFRSF21O75509 655 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 RFPL2O75678 378 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 KLHL18O94889 574 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 CYP2A6P11509 494 aaPredicted RBP10.51□□□□□ -0.73
BEST1-201ENST00000378043 HLA-EP13747 358 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 ETFAP13804 333 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 CD36P16671 472 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 LIPAP38571 399 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 PRLHRP49683 370 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 CD300CQ08708 224 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 HIST2H2ACQ16777 129 aaPredicted RBP10.51□□□□□ -0.73
BEST1-201ENST00000378043 DGUOKQ16854 277 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 MPEG1Q2M385 716 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 ZNF658BQ4V348 819 aaPredicted RBP10.51□□□□□ -0.73
BEST1-201ENST00000378043 SYTL3Q4VX76 610 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 CATSPEREQ5SY80 951 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 UBE2UQ5VVX9 321 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 SLC39A5Q6ZMH5 540 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 ARMCX6Q7L4S7 300 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 CCDC103Q8IW40 242 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 SVOPQ8N4V2 548 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 C11orf65Q8NCR3 313 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 VPS37AQ8NEZ2 397 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 PHF10Q8WUB8 498 aaKnown RBP10.51□□□□□ -0.73
BEST1-201ENST00000378043 ZNF480Q8WV37 535 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 STARD8Q92502 1023 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 IRF7Q92985 503 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 GLYATL1Q969I3 302 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 ADPRHL2Q9NX46 363 aa10.51□□□□□ -0.73
BEST1-201ENST00000378043 NFKBIL1Q9UBC1 381 aaPredicted RBP10.51□□□□□ -0.73
BEST1-201ENST00000378043 TSPAN11A1L157 253 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 KRBA1A5PL33 1030 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 CATP04040 527 aaKnown RBP10.5□□□□□ -0.73
BEST1-201ENST00000378043 CDH3P22223 829 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 SLC19A1P41440 591 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 OR1E2P47887 323 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 MC1RQ01726 317 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms