RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 PSD4Q8NDX1 1056 aa17.45■□□□□ 0.38
SF1-203ENST00000377387 VPS37AQ8NEZ2 397 aa17.45■□□□□ 0.38
SF1-203ENST00000377387 OR7G3Q8NG95 312 aa17.45■□□□□ 0.38
SF1-203ENST00000377387 OR9Q2Q8NGE9 314 aa17.45■□□□□ 0.38
SF1-203ENST00000377387 CIDECQ96AQ7 238 aaPredicted RBP17.45■□□□□ 0.38
SF1-203ENST00000377387 TMEM159Q96B96 161 aa17.45■□□□□ 0.38
SF1-203ENST00000377387 CORO1BQ9BR76 489 aa17.45■□□□□ 0.38
SF1-203ENST00000377387 ITPAQ9BY32 194 aa17.45■□□□□ 0.38
SF1-203ENST00000377387 TRIM39Q9HCM9 518 aa17.45■□□□□ 0.38
SF1-203ENST00000377387 STOX2Q9P2F5 926 aaPredicted RBP17.45■□□□□ 0.38
SF1-203ENST00000377387 RHCGQ9UBD6 479 aa17.45■□□□□ 0.38
SF1-203ENST00000377387 RBMX2Q9Y388 322 aaKnown RBP17.45■□□□□ 0.38
SF1-203ENST00000377387 MAP4K5Q9Y4K4 846 aa17.45■□□□□ 0.38
SF1-203ENST00000377387 HSPE1-MOB4S4R3N1 261 aa17.45■□□□□ 0.38
SF1-203ENST00000377387 SGTAO43765 313 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 TGFB1P01137 390 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 MPC1LP0DKB6 136 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 RAB33AQ14088 237 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 GANABQ14697 944 aaKnown RBP17.44■□□□□ 0.38
SF1-203ENST00000377387 TIGD6Q17RP2 521 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 FAHD1Q6P587 224 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 RAVER1Q8IY67 606 aaKnown RBP17.44■□□□□ 0.38
SF1-203ENST00000377387 C2orf73Q8N5S3 287 aaPredicted RBP17.44■□□□□ 0.38
SF1-203ENST00000377387 GTPBP3Q969Y2 492 aaKnown RBP17.44■□□□□ 0.38
SF1-203ENST00000377387 TCF25Q9BQ70 676 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 CCNB1IP1Q9NPC3 277 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 PCDHGB3Q9Y5G1 929 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 KIAA0100Q14667 2235 aaKnown RBP17.44■□□□□ 0.38
SF1-203ENST00000377387 FADS2P1A8MWK0 482 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 TGM1P22735 817 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 HBA1P69905 142 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 PPIGQ13427 754 aaKnown RBP eCLIP17.44■□□□□ 0.385e-11■□□□□ 9.8
SF1-203ENST00000377387 GDPD4Q6W3E5 623 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 HTR3DQ70Z44 454 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 OR10G2Q8NGC3 310 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 NEIL2Q969S2 332 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 MCCC1Q96RQ3 725 aaPredicted RBP17.44■□□□□ 0.38
SF1-203ENST00000377387 HEPHQ9BQS7 1158 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 DOHHQ9BU89 302 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 NDUFAF4Q9P032 175 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 SLC25A13Q9UJS0 675 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 ERVW-1Q9UQF0 538 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 M0R082 166 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 C6orf47O95873 294 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 DNTTP04053 509 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 IDSP22304 550 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 GRK5P34947 590 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 CSTF3Q12996 717 aaKnown RBP17.44■□□□□ 0.38
SF1-203ENST00000377387 NOGQ13253 232 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 TP53BP2Q13625 1128 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 NCCRP1Q6ZVX7 275 aaPredicted RBP17.44■□□□□ 0.38
SF1-203ENST00000377387 SYTL1Q8IYJ3 562 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 NFKBIDQ8NI38 313 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 SLC38A4Q969I6 547 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 ZNF558Q96NG5 402 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 SLC46A2Q9BY10 475 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 SPATA6Q9NWH7 488 aaPredicted RBP17.44■□□□□ 0.38
SF1-203ENST00000377387 SPASTQ9UBP0 616 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 LYVE1Q9Y5Y7 322 aa17.44■□□□□ 0.38
SF1-203ENST00000377387 TMEM229AB2RXF0 380 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 OLFM2O95897 454 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 GTF2E2P29084 291 aaKnown RBP17.43■□□□□ 0.38
SF1-203ENST00000377387 PRIM2P49643 509 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 STARD3Q14849 445 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 ARSIQ5FYB1 569 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 PLEKHG7Q6ZR37 379 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 CLIP4Q8N3C7 705 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 C11orf65Q8NCR3 313 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 GGHQ92820 318 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 HRASLS5Q96KN8 279 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 PKP4Q99569 1192 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 OR51E2Q9H255 320 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 OR51B5Q9H339 312 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 FBXO8Q9NRD0 319 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 GPATCH2Q9NW75 528 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 A8MU76 341 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 RFPL2O75678 378 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 POU1F1P28069 291 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 RECQLP46063 649 aaPredicted RBP17.43■□□□□ 0.38
SF1-203ENST00000377387 PTPN5P54829 565 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 EXOC3L2Q2M3D2 409 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 MSANTD1Q6ZTZ1 278 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 TCEAL8Q8IYN2 117 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 TBC1D20Q96BZ9 403 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 CHCHD6Q9BRQ6 235 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 SZT2Q5T011 3432 aa17.43■□□□□ 0.38
SF1-203ENST00000377387 C1orf226A1L170 272 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 TMEM221A6NGB7 291 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 LEFTY1O75610 366 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 HOXD10P28358 340 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 CD40LGP29965 261 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 VEZF1Q14119 521 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 SLC44A2Q8IWA5 706 aaPredicted RBP17.42■□□□□ 0.38
SF1-203ENST00000377387 FAM217AQ8IXS0 508 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 STX19Q8N4C7 294 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 RASGEF1AQ8N9B8 481 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 PHF10Q8WUB8 498 aaKnown RBP17.42■□□□□ 0.38
SF1-203ENST00000377387 LINC00597Q9H2U6 94 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 HCFC1R1Q9NWW0 138 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 GIN1Q9NXP7 522 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms