RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 MYO9BQ13459 2157 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 DOCK8Q8NF50 2099 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 CDK9P50750 372 aaKnown RBP19.42■□□□□ 0.7
VSX1-202ENST00000376709 BIRC2Q13490 618 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 TMIGD1Q6UXZ0 262 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 SYNPOQ8N3V7 929 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 ARL10Q8N8L6 244 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 OR4K1Q8NGD4 311 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 MRPL38Q96DV4 380 aaKnown RBP19.42■□□□□ 0.7
VSX1-202ENST00000376709 ASPSCR1Q9BZE9 553 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 AMBRA1Q9C0C7 1298 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 TM7SF3Q9NS93 570 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 SIRT5Q9NXA8 310 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 ATP6V1HQ9UI12 483 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 EXO1Q9UQ84 846 aaKnown RBP19.42■□□□□ 0.7
VSX1-202ENST00000376709 CFAP20Q9Y6A4 193 aaKnown RBP19.42■□□□□ 0.7
VSX1-202ENST00000376709 STON1Q9Y6Q2 735 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 MYO1GB0I1T2 1018 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 hCG_2039718K7EN88 272 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 FABP3P05413 133 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 PIGAP37287 484 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 PIK3CBP42338 1070 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 ARHGDIAP52565 204 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 KCNAB2Q13303 367 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 VEZF1Q14119 521 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 RGNQ15493 299 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 CST6Q15828 149 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 WSCD2Q2TBF2 565 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 ZBED5Q49AG3 693 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 ZNF385BQ569K4 471 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 AGBL4Q5VU57 503 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 TMEM26Q6ZUK4 368 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 CHST15Q7LFX5 561 aaPredicted RBP19.42■□□□□ 0.7
VSX1-202ENST00000376709 R3HCC1LQ7Z5L2 792 aaKnown RBP19.42■□□□□ 0.7
VSX1-202ENST00000376709 VTCN1Q7Z7D3 282 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 ALDH16A1Q8IZ83 802 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 WDR48Q8TAF3 677 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 ZFP90Q8TF47 636 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 HSH2DQ96JZ2 352 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 NPLQ9BXD5 320 aaPredicted RBP19.42■□□□□ 0.7
VSX1-202ENST00000376709 ADNPQ9H2P0 1102 aa19.42■□□□□ 0.7
VSX1-202ENST00000376709 RPN2P04844 631 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 KLK1P06870 262 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 NUDT7P0C024 238 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 HLCSP50747 726 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 TAS2R38P59533 333 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 CYP2A13Q16696 494 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.41■□□□□ 0.7
VSX1-202ENST00000376709 OR2T5Q6IEZ7 315 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 SHQ1Q6PI26 577 aaKnown RBP19.41■□□□□ 0.7
VSX1-202ENST00000376709 PARM1Q6UWI2 310 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 LCTLQ6UWM7 567 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 NUDT18Q6ZVK8 323 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 KRT78Q8N1N4 520 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 OR2T29Q8NH02 315 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.41■□□□□ 0.7
VSX1-202ENST00000376709 PPCDCQ96CD2 204 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 LIN28AQ9H9Z2 209 aaKnown RBP19.41■□□□□ 0.7
VSX1-202ENST00000376709 LTB4R2Q9NPC1 389 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 VNN3Q9NY84 501 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 SPASTQ9UBP0 616 aa19.41■□□□□ 0.7
VSX1-202ENST00000376709 FAF1Q9UNN5 650 aaPredicted RBP19.41■□□□□ 0.7
VSX1-202ENST00000376709 SPTBN5Q9NRC6 3674 aaKnown RBP19.41■□□□□ 0.7
VSX1-202ENST00000376709 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.4■□□□□ 0.7
VSX1-202ENST00000376709 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.4■□□□□ 0.7
VSX1-202ENST00000376709 TRMUO75648 421 aaKnown RBP19.4■□□□□ 0.7
VSX1-202ENST00000376709 APODP05090 189 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 RPL3P39023 403 aaKnown RBP19.4■□□□□ 0.7
VSX1-202ENST00000376709 RAD23AP54725 363 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 TAS2R50P59544 299 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 MC1RQ01726 317 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 C2orf80Q0P641 193 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 IER5LQ5T953 404 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 CBLL1Q75N03 491 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 EIF3MQ7L2H7 374 aaKnown RBP19.4■□□□□ 0.7
VSX1-202ENST00000376709 HORMAD1Q86X24 394 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 CLVS1Q8IUQ0 354 aaPredicted RBP19.4■□□□□ 0.7
VSX1-202ENST00000376709 OR5K2Q8NHB8 316 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 C16orf78Q8WTQ4 265 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 FGF14Q92915 247 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 MAL2Q969L2 176 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 TPD52L3Q96J77 140 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 POLR1BQ9H9Y6 1135 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 TM9SF3Q9HD45 589 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 TAC3Q9UHF0 121 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 A0A1B0GVG6 124 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 B4GAT1O43505 415 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 FURINP09958 794 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 GDI1P31150 447 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 EIF2DP41214 584 aaKnown RBP19.4■□□□□ 0.7
VSX1-202ENST00000376709 HBA1P69905 142 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 RFX4Q33E94 735 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 KCTD8Q6ZWB6 473 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 METTL4Q8N3J2 472 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 RPP25Q9BUL9 199 aaKnown RBP19.4■□□□□ 0.7
VSX1-202ENST00000376709 CHST8Q9H2A9 424 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 MYNNQ9NPC7 610 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 PCDHGA8Q9Y5G5 932 aa19.4■□□□□ 0.7
VSX1-202ENST00000376709 DIRAS1O95057 198 aa19.39■□□□□ 0.69
VSX1-202ENST00000376709 PTX3P26022 381 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms