RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 NRROSQ86YC3 692 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 HPS6Q86YV9 775 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 LMNTD1Q8N9Z9 388 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 OR4C6Q8NH72 309 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 CHTF18Q8WVB6 975 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 SH3KBP1Q96B97 665 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 RNPEPL1Q9HAU8 725 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 ABCD2Q9UBJ2 740 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 MAPRE3Q9UPY8 281 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 ICKQ9UPZ9 632 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 AKAP13Q12802 2813 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 AQP9O43315 295 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 PDE5AO76074 875 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 SDC1P18827 310 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 AK4P27144 223 aaPredicted RBP20.27■□□□□ 0.84
HLA-C-201ENST00000376228 ACTR1BP42025 376 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 CCR8P51685 355 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 ACTR1AP61163 376 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 PRDX1Q06830 199 aaKnown RBP20.27■□□□□ 0.84
HLA-C-201ENST00000376228 ILF3Q12906 894 aaKnown RBP eCLIP20.27■□□□□ 0.843e-17■□□□□ 9.4
HLA-C-201ENST00000376228 DEFB133Q30KQ1 61 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 PRRT3Q5FWE3 981 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 TMIGD1Q6UXZ0 262 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 HID1Q8IV36 788 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 ADAMTS14Q8WXS8 1223 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 JADE3Q92613 823 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 TESCQ96BS2 214 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 LRRC58Q96CX6 371 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 AIF1LQ9BQI0 150 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 LRRC61Q9BV99 259 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 DMRT3Q9NQL9 472 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 CD300AQ9UGN4 299 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 PCDHB11Q9Y5F2 797 aa20.27■□□□□ 0.84
HLA-C-201ENST00000376228 MYO1DO94832 1006 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 CELA2BP08218 269 aaPredicted RBP20.27■□□□□ 0.83
HLA-C-201ENST00000376228 PCNAP12004 261 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 SHMT2P34897 504 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 ABATP80404 500 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 REEP5Q00765 189 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 ACSM2AQ08AH3 577 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 PROX2Q3B8N5 592 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 SAMD4BQ5PRF9 694 aaKnown RBP20.27■□□□□ 0.83
HLA-C-201ENST00000376228 ICE2Q659A1 982 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 ACSM2BQ68CK6 577 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 RIMKLAQ8IXN7 391 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 OR2A1Q8NGT9 310 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 VPS33AQ96AX1 596 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 APOLD1Q96LR9 279 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 TMEM74Q96NL1 305 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 CNTNAP3BQ96NU0 1288 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 GSDMCQ9BYG8 508 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 CNTNAP3Q9BZ76 1288 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 NLGN3Q9NZ94 848 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 OR6C2Q9NZP2 312 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 ZNF624Q9P2J8 865 aaPredicted RBP20.27■□□□□ 0.83
HLA-C-201ENST00000376228 BCAP29Q9UHQ4 241 aa20.27■□□□□ 0.83
HLA-C-201ENST00000376228 CROCCQ5TZA2 2017 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 C9JVG2 144 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 DKK1O94907 266 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 EML2O95834 649 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 BLKP51451 505 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 CLDN6P56747 220 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 RPS13P62277 151 aaKnown RBP20.26■□□□□ 0.83
HLA-C-201ENST00000376228 DDX39BQ13838 428 aaKnown RBP20.26■□□□□ 0.83
HLA-C-201ENST00000376228 DPY19L1Q2PZI1 675 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 TIGD2Q4W5G0 525 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 PAGE3Q5JUK9 113 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 AAGABQ6PD74 315 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 DHRS13Q6UX07 377 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 MSANTD1Q6ZTZ1 278 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 MARCH9Q86YJ5 346 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 RNF175Q8N4F7 328 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 DNAJB8Q8NHS0 232 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 CCL4L1Q8NHW4 92 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 ZMYND15Q9H091 742 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 SPNS1Q9H2V7 528 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 SPASTQ9UBP0 616 aa20.26■□□□□ 0.83
HLA-C-201ENST00000376228 SUCOQ9UBS9 1254 aaKnown RBP20.26■□□□□ 0.83
HLA-C-201ENST00000376228 C15orf38-AP3S2A0A0A6YYH1 394 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 OR5K4A6NMS3 321 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 FKBP6O75344 327 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 PSMG1O95456 288 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 ETHE1O95571 254 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 PRPS1L1P21108 318 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 HRH2P25021 359 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 PTX3P26022 381 aaPredicted RBP20.25■□□□□ 0.83
HLA-C-201ENST00000376228 SLC19A1P41440 591 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 HNRNPFP52597 415 aaKnown RBP20.25■□□□□ 0.83
HLA-C-201ENST00000376228 DAB2P98082 770 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 ARPINQ7Z6K5 226 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 C2orf73Q8N5S3 287 aaPredicted RBP20.25■□□□□ 0.83
HLA-C-201ENST00000376228 STARD8Q92502 1023 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 SLC45A3Q96JT2 553 aa20.25■□□□□ 0.83
HLA-C-201ENST00000376228 GOLGA4Q13439 2230 aaKnown RBP20.25■□□□□ 0.83
HLA-C-201ENST00000376228 RFPL3O75679 317 aa20.24■□□□□ 0.83
HLA-C-201ENST00000376228 ALPPL2P10696 532 aa20.24■□□□□ 0.83
HLA-C-201ENST00000376228 CKMT2P17540 419 aa20.24■□□□□ 0.83
HLA-C-201ENST00000376228 XRCC1P18887 633 aaPredicted RBP20.24■□□□□ 0.83
HLA-C-201ENST00000376228 SLC6A2P23975 617 aa20.24■□□□□ 0.83
HLA-C-201ENST00000376228 ASMTP46597 345 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms