RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 AFAP1L2Q8N4X5 818 aa13.42□□□□□ -0.26
NELFE-201ENST00000375425 ZNF740Q8NDX6 193 aa13.42□□□□□ -0.26
NELFE-201ENST00000375425 PLPP5Q8NEB5 264 aa13.42□□□□□ -0.26
NELFE-201ENST00000375425 OR5T3Q8NGG3 340 aa13.42□□□□□ -0.26
NELFE-201ENST00000375425 SLC5A11Q8WWX8 675 aa13.42□□□□□ -0.26
NELFE-201ENST00000375425 NEIL2Q969S2 332 aa13.42□□□□□ -0.26
NELFE-201ENST00000375425 PEX11GQ96HA9 241 aa13.42□□□□□ -0.26
NELFE-201ENST00000375425 NAPGQ99747 312 aaPredicted RBP13.42□□□□□ -0.26
NELFE-201ENST00000375425 RNF32Q9H0A6 362 aa13.42□□□□□ -0.26
NELFE-201ENST00000375425 ZFATQ9P243 1243 aa13.42□□□□□ -0.26
NELFE-201ENST00000375425 CENPEQ02224 2701 aa13.42□□□□□ -0.26
NELFE-201ENST00000375425 SCN3AQ9NY46 2000 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 TRBC2A0A5B9 178 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 OR5H15A6NDH6 313 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 EFCAB8A8MWE9 144 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 CCDC188H7C350 402 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 DNAJB6O75190 326 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 ZNF37AP17032 561 aaPredicted RBP13.41□□□□□ -0.26
NELFE-201ENST00000375425 IL10P22301 178 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 RHAGQ02094 409 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 MGAT5Q09328 741 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 PDIA2Q13087 525 aaKnown RBP13.41□□□□□ -0.26
NELFE-201ENST00000375425 FASTKD3Q14CZ7 662 aaKnown RBP13.41□□□□□ -0.26
NELFE-201ENST00000375425 NSDHLQ15738 373 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 DEFB134Q4QY38 66 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 ZC3HC1Q86WB0 502 aaKnown RBP13.41□□□□□ -0.26
NELFE-201ENST00000375425 TBC1D19Q8N5T2 526 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 FBXO36Q8NEA4 188 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 SUN3Q8TAQ9 357 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 TSNARE1Q96NA8 513 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 RBCK1Q9BYM8 510 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 SPNS1Q9H2V7 528 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 MOCS1Q9NZB8 636 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 ZFP69BQ9UJL9 534 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 SLC22A14Q9Y267 594 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 SNX24Q9Y343 169 aa13.41□□□□□ -0.26
NELFE-201ENST00000375425 CDC7O00311 574 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 GALR3O60755 368 aaPredicted RBP13.4□□□□□ -0.26
NELFE-201ENST00000375425 PRAMEF2O60811 474 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 RASAL1O95294 804 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 B3GALT4O96024 378 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 MYBL2P10244 700 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 ALOX12P18054 663 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 SCTRP47872 440 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 TAS2R39P59534 338 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 ACTN3Q08043 901 aaPredicted RBP13.4□□□□□ -0.26
NELFE-201ENST00000375425 ZNF460Q14592 562 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 ABRAXAS2Q15018 415 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 INAQ16352 499 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 PPP1R3AQ16821 1122 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 SFT2D3Q587I9 215 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 FCRLBQ6BAA4 426 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 ZNF787Q6DD87 383 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 H3F3CQ6NXT2 135 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 THOC6Q86W42 341 aaKnown RBP13.4□□□□□ -0.26
NELFE-201ENST00000375425 NKAPQ8N5F7 415 aaKnown RBP13.4□□□□□ -0.26
NELFE-201ENST00000375425 M1APQ8TC57 530 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 NT5CQ8TCD5 201 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 ANKRD49Q8WVL7 239 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 ANKRD7Q92527 254 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 NR4A3Q92570 626 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 TBC1D20Q96BZ9 403 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 ZNF354BQ96LW1 612 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 OR1F2PQ96R84 312 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 KRT12Q99456 494 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 LANCL2Q9NS86 450 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 DYRK1BQ9Y463 629 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 KCNE2Q9Y6J6 123 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 SVILO95425 2214 aa13.4□□□□□ -0.26
NELFE-201ENST00000375425 FAM95CA0A1B0GW59 222 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 CTAGE15A4D2H0 777 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 NPEPPSL1A6NEC2 478 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 MAGEB17A8MXT2 336 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 E7ESA3 106 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 CHST10O43529 356 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 FHP07954 510 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 STSP08842 583 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 ZNF888P0CJ79 500 aaPredicted RBP13.39□□□□□ -0.27
NELFE-201ENST00000375425 AHRP35869 848 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 RPL21P46778 160 aaKnown RBP13.39□□□□□ -0.27
NELFE-201ENST00000375425 TDGF1P3P51864 188 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 KCNK10P57789 538 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 OLR1P78380 273 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 MRPS25P82663 173 aaKnown RBP13.39□□□□□ -0.27
NELFE-201ENST00000375425 SRSF11Q05519 484 aaKnown RBP13.39□□□□□ -0.27
NELFE-201ENST00000375425 RGS1Q08116 209 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 EXT1Q16394 746 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 ACER2Q5QJU3 275 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 PAPD4Q6PIY7 484 aaKnown RBP13.39□□□□□ -0.27
NELFE-201ENST00000375425 CTAGE6Q86UF2 777 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 ANKRD53Q8N9V6 530 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 UTP15Q8TED0 518 aaKnown RBP13.39□□□□□ -0.27
NELFE-201ENST00000375425 TSLPQ969D9 159 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 LPAR4Q99677 370 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 KCNK13Q9HB14 408 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 RNF14Q9UBS8 474 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 CSMD1Q96PZ7 3565 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 PIAS1O75925 651 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 HNF4AP41235 474 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 ST13P50502 369 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms