RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 C18orf25Q96B23 403 aaPredicted RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 DUS3LQ96G46 650 aaKnown RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 ZDHHC12Q96GR4 267 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 C1QTNF7Q9BXJ2 289 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 SLC23A1Q9UHI7 598 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 ABT1Q9ULW3 272 aaKnown RBP9.93□□□□□ -0.82
CD28-202ENST00000374481 ERVW-1Q9UQF0 538 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 ASF1AQ9Y294 204 aa9.93□□□□□ -0.82
CD28-202ENST00000374481 LEUTXA8MZ59 168 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 B4DXG7 233 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 MUSKO15146 869 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 SHOXO15266 292 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 SLC28A2O43868 658 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 MMP20O60882 483 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 NME6O75414 186 aaPredicted RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 GSRP00390 522 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 SPARCP09486 303 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 CELP19835 753 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 PCSK1P29120 753 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 HSPA7P48741 367 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 MLLT10P55197 1068 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 HSPA14Q0VDF9 509 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 SPP2Q13103 211 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 NADSYN1Q6IA69 706 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 FAM180AQ6UWF9 173 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.92□□□□□ -0.82
CD28-202ENST00000374481 TCTE3Q8IZS6 198 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 LRRC46Q96FV0 321 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 ST6GAL2Q96JF0 529 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 PGLYRP2Q96PD5 576 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 COPS8Q99627 209 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 WDR83Q9BRX9 315 aaKnown RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 SLIRPQ9GZT3 109 aaKnown RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 PXMP2Q9NR77 195 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 TEX10Q9NXF1 929 aaPredicted RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 UXTQ9UBK9 157 aaPredicted RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 KLK4Q9Y5K2 254 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 SLC7A4O43246 635 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 PRKAR2AP13861 404 aaKnown RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 SYN1P17600 705 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 ENGP17813 658 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 EPORP19235 508 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 SOX3P41225 446 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 CEBPGP53567 150 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 KIAA1024LP59773 190 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 ISL1P61371 349 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 EXOSC2Q13868 293 aaKnown RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 GTF2H2Q13888 395 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 KRT33BQ14525 404 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 C21orf62-AS1Q17RA5 79 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 UNC50Q53HI1 259 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 TREML2Q5T2D2 321 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 GCNT6Q5T4J0 391 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 GTF2IRD2BQ6EKJ0 949 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 DPY19L2P1Q6NXN4 242 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 GTF2H2CQ6P1K8 395 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 GTF2IRD2Q86UP8 949 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 FEVQ99581 238 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 OR6C2Q9NZP2 312 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 ZDHHC11BP0C7U3 371 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 CBR1P16152 277 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 MNDAP41218 407 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 SSTP61278 116 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 IFITM3Q01628 133 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 XAF1Q6GPH4 301 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 LARP4Q71RC2 724 aaKnown RBP eCLIP9.92□□□□□ -0.82
CD28-202ENST00000374481 METTL3Q86U44 580 aaKnown RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 PIM3Q86V86 326 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 NLGN1Q8N2Q7 840 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 KLHL36Q8N4N3 616 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 C2CD4CQ8TF44 421 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 C3orf49Q96BT1 292 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 HSPA12BQ96MM6 686 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 OR2M2Q96R28 347 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 ZNF300Q96RE9 604 aaPredicted RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 ARHGAP39Q9C0H5 1083 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 REEP4Q9H6H4 257 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 GFOD1Q9NXC2 390 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 PRKAG2Q9UGJ0 569 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 OSGIN1Q9UJX0 560 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 A0A075B6Q4 140 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 SLC12A8A0AV02 714 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 OR6C65A6NJZ3 312 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 ANKRD28O15084 1053 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 SEPT4O43236 478 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 SLIT3O75094 1523 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 SOX14O95416 240 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 PKMP14618 531 aaKnown RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 CHRNA4P43681 627 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 RAB8AP61006 207 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 ASAH1Q13510 395 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 LARS2Q15031 903 aaKnown RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 ATG9BQ674R7 924 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 EIF5AL1Q6IS14 154 aaKnown RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 OR52L1Q8NGH7 329 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 NSUN5Q96P11 429 aaKnown RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 TSSK6Q9BXA6 273 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 POLR1EQ9GZS1 481 aaKnown RBP9.92□□□□□ -0.82
CD28-202ENST00000374481 SLC2A6Q9UGQ3 507 aa9.92□□□□□ -0.82
CD28-202ENST00000374481 ZFR2Q9UPR6 939 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms