RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MAGEB17A8MXT2 336 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 ASNA1O43681 348 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 SP1P08047 785 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 SSTR2P30874 369 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 KRTAP10-9P60411 292 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 HSF1Q00613 529 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 OC90Q02509 493 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-202ENST00000374426 ACTN3Q08043 901 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-202ENST00000374426 RNFT1Q5M7Z0 435 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 ZNF468Q5VIY5 522 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-202ENST00000374426 CAPN13Q6MZZ7 669 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-202ENST00000374426 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-202ENST00000374426 C17orf64Q86WR6 236 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 LGI4Q8N135 537 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 AGGF1Q8N302 714 aaeCLIP12.96□□□□□ -0.33
CXCL12-202ENST00000374426 SPC24Q8NBT2 197 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 OR5T3Q8NGG3 340 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 AGAP11Q8TF27 550 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 OR1F2PQ96R84 312 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 FAM129AQ9BZQ8 928 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 ATG10Q9H0Y0 220 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 GPAMQ9HCL2 828 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 LRFN1Q9P244 771 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 ITGB1BP2Q9UKP3 347 aa12.96□□□□□ -0.33
CXCL12-202ENST00000374426 MAP1AP78559 2803 aaPredicted RBP12.96□□□□□ -0.34
CXCL12-202ENST00000374426 SDR42E2A6NKP2 422 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 EIF3FO00303 357 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-202ENST00000374426 DNAJB6O75190 326 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 HAUS5O94927 633 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 SLC35G6P0C7Q6 338 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 CDH1P12830 882 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 MLNP12872 115 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 IL10P22301 178 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 OR4D2P58180 307 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 SLC26A5P58743 744 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 MPP1Q00013 466 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 TIAL1Q01085 375 aaKnown RBP eCLIP12.95□□□□□ -0.34
CXCL12-202ENST00000374426 NAE1Q13564 534 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 SLC25A25Q6KCM7 469 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 AGTRAPQ6RW13 159 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 C3P1Q6ZMU1 363 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 FGD2Q7Z6J4 655 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 GAS2L3Q86XJ1 694 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 DOLPP1Q86YN1 238 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 GHDCQ8N2G8 530 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 KIF2BQ8N4N8 673 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 AFAP1L2Q8N4X5 818 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 HORMAD2Q8N7B1 307 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 MFSD9Q8NBP5 474 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 ZNF740Q8NDX6 193 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 ELP5Q8TE02 316 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 EEF1AKMT1Q8WVE0 214 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 SERPINB12Q96P63 405 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 AARSD1Q9BTE6 412 aaKnown RBP12.95□□□□□ -0.34
CXCL12-202ENST00000374426 SGPP1Q9BX95 441 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 CDCP1Q9H5V8 836 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 HOMER3Q9NSC5 361 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 C20orf96Q9NUD7 363 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-202ENST00000374426 FBXO5Q9UKT4 447 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 COMMD10Q9Y6G5 202 aa12.95□□□□□ -0.34
CXCL12-202ENST00000374426 GOLGA8MH3BSY2 632 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 ADAM10O14672 748 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 NDC80O14777 642 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 CEP104O60308 925 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 NME2P1O60361 137 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 GALR3O60755 368 aaPredicted RBP12.94□□□□□ -0.34
CXCL12-202ENST00000374426 SLC25A12O75746 678 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 FHP07954 510 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 ABOP16442 354 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 NPPBP16860 134 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 ZNF24P17028 368 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 NME2P22392 152 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 CDC25BP30305 580 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 CXCR5P32302 372 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 MAGEA3P43357 314 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 TAS2R50P59544 299 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 HERC3Q15034 1050 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 TESK1Q15569 626 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 MAPKAPK3Q16644 382 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 PHKG1Q16816 387 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 TTC27Q6P3X3 843 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 LCTLQ6UWM7 567 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 RPS19BP1Q86WX3 136 aaKnown RBP12.94□□□□□ -0.34
CXCL12-202ENST00000374426 ZNF227Q86WZ6 799 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 CEP97Q8IW35 865 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 LMNTD2Q8IXW0 634 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 CPSF7Q8N684 471 aaKnown RBP12.94□□□□□ -0.34
CXCL12-202ENST00000374426 ACBD4Q8NC06 268 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 FAM98AQ8NCA5 519 aaKnown RBP12.94□□□□□ -0.34
CXCL12-202ENST00000374426 MCUQ8NE86 351 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 ABHD11Q8NFV4 315 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 PHF10Q8WUB8 498 aaKnown RBP12.94□□□□□ -0.34
CXCL12-202ENST00000374426 ALKBH8Q96BT7 664 aaKnown RBP12.94□□□□□ -0.34
CXCL12-202ENST00000374426 TBC1D20Q96BZ9 403 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 C14orf79Q96F83 325 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 DMRTA2Q96SC8 542 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 SPOCK3Q9BQ16 436 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 PARVBQ9HBI1 364 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 XAB2Q9HCS7 855 aaKnown RBP12.94□□□□□ -0.34
CXCL12-202ENST00000374426 TRMT6Q9UJA5 497 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms