RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TMEM102Q8N9M5 508 aaPredicted RBP10.01□□□□□ -0.81
COL5A1-202ENST00000371820 OR13C4Q8NGS5 318 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 OR2L2Q8NH16 312 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 LPGAT1Q92604 370 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 SGF29Q96ES7 293 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 LINC00615Q96LM1 132 aaPredicted RBP10.01□□□□□ -0.81
COL5A1-202ENST00000371820 CCM2Q9BSQ5 444 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 RAB33BQ9H082 229 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 RIC8BQ9NVN3 520 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 NLE1Q9NVX2 485 aaPredicted RBP10.01□□□□□ -0.81
COL5A1-202ENST00000371820 TAS2R13Q9NYV9 303 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 TMEM9Q9P0T7 183 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 HEBP2Q9Y5Z4 205 aa10.01□□□□□ -0.81
COL5A1-202ENST00000371820 A0A087WXM4 84 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 C17orf113A0A1B0GUU1 675 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 A8MU76 341 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 C9orf172C9J069 976 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 AZIN1O14977 448 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 CD3EAPO15446 510 aaKnown RBP10□□□□□ -0.81
COL5A1-202ENST00000371820 GPR39O43194 453 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 H6PDO95479 791 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 C9P02748 559 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 ITGB2P05107 769 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 CCL4P13236 92 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 FDXRP22570 491 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 FASP25445 335 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 PSMA3P25788 255 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 ARNTP27540 789 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 CAPZBP47756 277 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 PRLHRP49683 370 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 NUP107P57740 925 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 MS4A2Q01362 244 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 MC2RQ01718 297 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 CACNG1Q06432 222 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 OLIG2Q13516 323 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 NFE2L1Q14494 772 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 PTPRCAPQ14761 206 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 PLCL1Q15111 1095 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 TLR1Q15399 786 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 SMU1Q2TAY7 513 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 LINC00303Q3SY05 128 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 LRRC23Q53EV4 343 aaPredicted RBP10□□□□□ -0.81
COL5A1-202ENST00000371820 ZRANB3Q5FWF4 1079 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 MTX3Q5HYI7 312 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 AARS2Q5JTZ9 985 aaKnown RBP10□□□□□ -0.81
COL5A1-202ENST00000371820 METRNLQ641Q3 311 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 OGFOD2Q6N063 350 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 CNSTQ6PJW8 725 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 ZBTB49Q6ZSB9 765 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 DET1Q7L5Y6 550 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 ISCA2Q86U28 154 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 EXD3Q8N9H8 876 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 PNPT1Q8TCS8 783 aaKnown RBP10□□□□□ -0.81
COL5A1-202ENST00000371820 AGR3Q8TD06 166 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 ZFPM2Q8WW38 1151 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 ZDHHC12Q96GR4 267 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 DNAJC1Q96KC8 554 aaKnown RBP10□□□□□ -0.81
COL5A1-202ENST00000371820 CD180Q99467 661 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 C1QTNF3Q9BXJ4 246 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 TRIM54Q9BYV2 358 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 DERL2Q9GZP9 239 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 GSTO2Q9H4Y5 243 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 CLK4Q9HAZ1 481 aaKnown RBP10□□□□□ -0.81
COL5A1-202ENST00000371820 FBXO8Q9NRD0 319 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 CCM2LQ9NUG4 571 aaPredicted RBP10□□□□□ -0.81
COL5A1-202ENST00000371820 ZDHHC3Q9NYG2 299 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 FOXJ2Q9P0K8 574 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 SCHIP1Q9P0W5 487 aaPredicted RBP10□□□□□ -0.81
COL5A1-202ENST00000371820 ACTR3BQ9P1U1 418 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 EPHA6Q9UF33 1036 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 KLHL3Q9UH77 587 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 COLEC10Q9Y6Z7 277 aa10□□□□□ -0.81
COL5A1-202ENST00000371820 OR52A4PA6NMU1 304 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 GOLGA8TH3BQL2 631 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 PYCARD-AS1I3L0S3 204 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 POLR1CO15160 346 aaPredicted RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 CAPN5O15484 640 aaPredicted RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 SLC28A2O43868 658 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 GMNNO75496 209 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 CRCPO75575 148 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 WISP3O95389 354 aaPredicted RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 BMP10O95393 424 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 TFAP2AP05549 437 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 MTHFD1P11586 935 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 ATP1B2P14415 290 aaPredicted RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 ZNF23P17027 643 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 ZNF26P17031 533 aaPredicted RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 TYRP1P17643 537 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 PSMA4P25789 261 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 ACRV1P26436 265 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 NSG1P42857 185 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 NME5P56597 212 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 EEFSECP57772 596 aaKnown RBP9.99□□□□□ -0.81
COL5A1-202ENST00000371820 GPR18Q14330 331 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 KRT33BQ14525 404 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 CLCA4Q14CN2 919 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 RPE65Q16518 533 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 KCTD21Q4G0X4 260 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 TMTC4Q5T4D3 741 aa9.99□□□□□ -0.81
COL5A1-202ENST00000371820 LYPLAL1Q5VWZ2 237 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms