RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 F2RL3Q96RI0 385 aa16.78■□□□□ 0.28
SSBP3-203ENST00000371319 MYNNQ9NPC7 610 aa16.78■□□□□ 0.28
SSBP3-203ENST00000371319 FAM120CQ9NX05 1096 aaKnown RBP16.78■□□□□ 0.28
SSBP3-203ENST00000371319 ACTR3BQ9P1U1 418 aa16.78■□□□□ 0.28
SSBP3-203ENST00000371319 EML5Q05BV3 1969 aa16.78■□□□□ 0.28
SSBP3-203ENST00000371319 SNRNP200O75643 2136 aaKnown RBP16.78■□□□□ 0.28
SSBP3-203ENST00000371319 KLK1P06870 262 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 TPP2P29144 1249 aaPredicted RBP16.77■□□□□ 0.28
SSBP3-203ENST00000371319 CMPK1P30085 196 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 BSGP35613 385 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 UBE2IP63279 158 aaKnown RBP16.77■□□□□ 0.28
SSBP3-203ENST00000371319 ZIC1Q15915 447 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 DUOXA1Q1HG43 343 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 FAM71E1Q6IPT2 247 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 ZNF425Q6IV72 752 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 DCP2Q8IU60 420 aaKnown RBP16.77■□□□□ 0.28
SSBP3-203ENST00000371319 PATE1Q8WXA2 126 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 SLCO4A1Q96BD0 722 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 LRGUKQ96M69 825 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 ZNF583Q96ND8 569 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 DPH7Q9BTV6 452 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 DUSP26Q9BV47 211 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 TRIM15Q9C019 465 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 AICDAQ9GZX7 198 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 SRMSQ9H3Y6 488 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 AHSPQ9NZD4 102 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 PCDHB3Q9Y5E6 796 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 SNX13Q9Y5W8 968 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 CEP192Q8TEP8 1941 aa16.77■□□□□ 0.28
SSBP3-203ENST00000371319 AQP12BA6NM10 295 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 ISM1B1AKI9 464 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 STK25O00506 426 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 CLEC3AO75596 197 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 STAMBPO95630 424 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 HRH2P25021 359 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 TRPC1P48995 793 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 PDE7AQ13946 482 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 GPR18Q14330 331 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 ZNF385BQ569K4 471 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 CPTPQ5TA50 214 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 UBE3DQ7Z6J8 389 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 SPPL2CQ8IUH8 684 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 SFTPA2Q8IWL1 248 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 AQP12AQ8IXF9 295 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 PQLC1Q8N2U9 271 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 MFSD2AQ8NA29 543 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 MAFAQ8NHW3 353 aaPredicted RBP16.77■□□□□ 0.27
SSBP3-203ENST00000371319 ZFPM2Q8WW38 1151 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 SARGQ9BW04 601 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 PIF1Q9H611 641 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 REEP4Q9H6H4 257 aa16.77■□□□□ 0.27
SSBP3-203ENST00000371319 ARHGEF17Q96PE2 2063 aaPredicted RBP16.76■□□□□ 0.27
SSBP3-203ENST00000371319 K7ESF4 209 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 RTCAO00442 366 aaKnown RBP16.76■□□□□ 0.27
SSBP3-203ENST00000371319 RFXANKO14593 260 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 NDUFS4O43181 175 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 MAP3K13O43283 966 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 GSNP06396 782 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 FURINP09958 794 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 HOXB3P14651 431 aaPredicted RBP16.76■□□□□ 0.27
SSBP3-203ENST00000371319 NCK1P16333 377 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 SLC7A1P30825 629 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 GRIA3P42263 894 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 MC1RQ01726 317 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 TAF8Q7Z7C8 310 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 PAQR7Q86WK9 346 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 TRIM48Q8IWZ4 208 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 CLECL1Q8IZS7 167 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 LILRA2Q8N149 483 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 TMEM132CQ8N3T6 1108 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 TTLQ8NG68 377 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 CCDC115Q96NT0 180 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 SH3GL1Q99961 368 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 LRRC61Q9BV99 259 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 LHX9Q9NQ69 397 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 POT1Q9NUX5 634 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 C6orf203Q9P0P8 240 aaPredicted RBP16.76■□□□□ 0.27
SSBP3-203ENST00000371319 CPNE7Q9UBL6 633 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 BTNL2Q9UIR0 455 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 RIMS3Q9UJD0 308 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 ERVK-11Q9UQG0 969 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 KLHL20Q9Y2M5 609 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 AP3M1Q9Y2T2 418 aa16.76■□□□□ 0.27
SSBP3-203ENST00000371319 KIR2DS5A0A0G2JLQ3 304 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 A0A0G2JNG1 304 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 TCRBV5S2A0A599 114 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 KIR2DS3K7RE56 304 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 CASQ2O14958 399 aaPredicted RBP16.75■□□□□ 0.27
SSBP3-203ENST00000371319 NVLO15381 856 aaKnown RBP16.75■□□□□ 0.27
SSBP3-203ENST00000371319 VIPP01282 170 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 DCNP07585 359 aaKnown RBP16.75■□□□□ 0.27
SSBP3-203ENST00000371319 CTSEP14091 401 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 JUNDP17535 347 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 MAOBP27338 520 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 CD38P28907 300 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 GZMMP51124 257 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 TAS2R50P59544 299 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 RPL6Q02878 288 aaKnown RBP16.75■□□□□ 0.27
SSBP3-203ENST00000371319 C2orf80Q0P641 193 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 C1orf61Q13536 156 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms