RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 EPYCQ99645 322 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 TREX2Q9BQ50 279 aaPredicted RBP12.1□□□□□ -0.47
HCFC1-202ENST00000369984 FGFBP2Q9BYJ0 223 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 FAM124BQ9H5Z6 455 aaPredicted RBP12.1□□□□□ -0.47
HCFC1-202ENST00000369984 LDAHQ9H6V9 325 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 BRF2Q9HAW0 419 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 PARP4Q9UKK3 1724 aaKnown RBP12.1□□□□□ -0.47
HCFC1-202ENST00000369984 H3BSA7 217 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 ADAMTS3O15072 1205 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 TLX2O43763 284 aaPredicted RBP12.1□□□□□ -0.47
HCFC1-202ENST00000369984 LAG3P18627 525 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 GDF10P55107 478 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 SEMG2Q02383 582 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 TMCO2Q7Z6W1 182 aaPredicted RBP12.1□□□□□ -0.47
HCFC1-202ENST00000369984 LAS2Q8IYD9 372 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 ZSCAN4Q8NAM6 433 aaPredicted RBP12.1□□□□□ -0.47
HCFC1-202ENST00000369984 ZCCHC3Q9NUD5 404 aaKnown RBP12.1□□□□□ -0.47
HCFC1-202ENST00000369984 ZIM2Q9NZV7 527 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 C2CD4BA6NLJ0 364 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 RABGGTBP53611 331 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 LRRC37A5PQ49AS3 106 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 TMEM198Q66K66 360 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 PACRGLQ8N7B6 248 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 FAM46DQ8NEK8 389 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 ZBTB26Q9HCK0 441 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 ECI2O75521 394 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 ANXA3P12429 323 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 TAS2R50P59544 299 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 RPS3AP61247 264 aaKnown RBP12.1□□□□□ -0.47
HCFC1-202ENST00000369984 FUT10Q6P4F1 479 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 PNPLA2Q96AD5 504 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 PYCR2Q96C36 320 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 NLGN3Q9NZ94 848 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 RNF6Q9Y252 685 aa12.1□□□□□ -0.47
HCFC1-202ENST00000369984 KLRG2A4D1S0 409 aaPredicted RBP12.09□□□□□ -0.47
HCFC1-202ENST00000369984 WDPCPO95876 746 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 OPN1SWP03999 348 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 CKMT2P17540 419 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 MATN1P21941 496 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 GRIA1P42261 906 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 LILRA4P59901 499 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 PLGLB1Q02325 96 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 MVKQ03426 396 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 INAVAQ3KP66 663 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 ZNF550Q7Z398 422 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 ASPNQ9BXN1 380 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 TMED5Q9Y3A6 229 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 SPAG17Q6Q759 2223 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 ZNF536O15090 1300 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 HHLA1C9JL84 531 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 KHNYNO15037 678 aaKnown RBP12.09□□□□□ -0.47
HCFC1-202ENST00000369984 COQ9O75208 318 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 BCAS1O75363 584 aaPredicted RBP12.09□□□□□ -0.47
HCFC1-202ENST00000369984 TRAPPC6AO75865 159 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 CDKN1CP49918 316 aaPredicted RBP12.09□□□□□ -0.47
HCFC1-202ENST00000369984 CAP1Q01518 475 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.09□□□□□ -0.475e-7■□□□□ 8.1
HCFC1-202ENST00000369984 C3orf33Q6P1S2 294 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 FANK1Q8TC84 345 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 PKP2Q99959 881 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 SLC32A1Q9H598 525 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 ZDHHC2Q9UIJ5 367 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 A8MUA0 341 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 NIPSNAP2O75323 286 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 ARL6IP5O75915 188 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 SOX14O95416 240 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 IL33O95760 270 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 C1orf127Q8N9H9 656 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 SMARCD2Q92925 531 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 KLRF1Q9NZS2 232 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 HCN2Q9UL51 889 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 CDH10Q9Y6N8 788 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 HTR3EA5X5Y0 456 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 J3QRK9 145 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 TAS2R39P59534 338 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 MOGSQ13724 837 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 RFTN1Q14699 578 aaPredicted RBP12.09□□□□□ -0.47
HCFC1-202ENST00000369984 SLC36A4Q6YBV0 504 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 PEX13Q92968 403 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 NINJ1Q92982 152 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 FBXL8Q96CD0 374 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 GIMAP5Q96F15 307 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 OR5B12Q96R08 314 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 SLC7A8Q9UHI5 535 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 MAGEA3P43357 314 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 EEFSECP57772 596 aaKnown RBP12.09□□□□□ -0.47
HCFC1-202ENST00000369984 RAB4BP61018 213 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 VARS2Q5ST30 1063 aaKnown RBP12.09□□□□□ -0.47
HCFC1-202ENST00000369984 KIAA1614Q5VZ46 1190 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 SLC15A3Q8IY34 581 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 NATD1Q8N6N6 113 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 FBRSQ9HAH7 460 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 PCDHB11Q9Y5F2 797 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 ATRNO75882 1429 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 RNF225M0QZC1 329 aaPredicted RBP12.09□□□□□ -0.47
HCFC1-202ENST00000369984 SFTPBP07988 381 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 CLRN1P58418 232 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 RPL26P61254 145 aaKnown RBP12.09□□□□□ -0.47
HCFC1-202ENST00000369984 HMGCS1Q01581 520 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms