RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 BEST4Q8NFU0 473 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 SNIP1Q8TAD8 396 aaKnown RBP8.32□□□□□ -1.08
LCA5-201ENST00000369846 PDCD2LQ9BRP1 358 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 CRB3Q9BUF7 120 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 TCEAL2Q9H3H9 227 aaPredicted RBP8.32□□□□□ -1.08
LCA5-201ENST00000369846 PLEKHA1Q9HB21 404 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 FAM118AQ9NWS6 357 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 SIRPGQ9P1W8 387 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 ZNF70Q9UC06 446 aaPredicted RBP8.32□□□□□ -1.08
LCA5-201ENST00000369846 ZMAT5Q9UDW3 170 aaKnown RBP8.32□□□□□ -1.08
LCA5-201ENST00000369846 SLC27A6Q9Y2P4 619 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 MED31Q9Y3C7 131 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 ATRNO75882 1429 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 ZNF878C9JN71 531 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 AIPO00170 330 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 RFXAPO00287 272 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 FGF10O15520 208 aaPredicted RBP8.32□□□□□ -1.08
LCA5-201ENST00000369846 SLC25A14O95258 325 aaPredicted RBP8.32□□□□□ -1.08
LCA5-201ENST00000369846 SNAPINO95295 136 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 PRAMEF12O95522 483 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 THP07101 528 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 ZNF20P17024 532 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 ENGP17813 658 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 AXLP30530 894 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 BRCC3P46736 316 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 CXCR3P49682 368 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 SEC23BQ15437 767 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 ECM1Q16610 540 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 TMEM44Q2T9K0 475 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 DRICH1Q6PGQ1 229 aaPredicted RBP8.32□□□□□ -1.08
LCA5-201ENST00000369846 AGMOQ6ZNB7 445 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 FCAMRQ8WWV6 532 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 CNOT9Q92600 299 aaKnown RBP8.32□□□□□ -1.08
LCA5-201ENST00000369846 OR4K3Q96R72 315 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 NDC1Q9BTX1 674 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 HDHD5Q9BXW7 423 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 FLRT1Q9NZU1 646 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 CPA4Q9UI42 421 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 B3GNT3Q9Y2A9 372 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 PCNTO95613 3336 aa8.32□□□□□ -1.08
LCA5-201ENST00000369846 A8MT66 165 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 KRBOX1C9JBD0 128 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 FGF1P05230 155 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 CHRNB2P17787 502 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 KLRK1P26718 216 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 PRKAR1BP31321 381 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 RFC2P35250 354 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 SLC26A2P50443 739 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 ZNF132P52740 706 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 INHBCP55103 352 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 RACK1P63244 317 aaKnown RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 GTF2BQ00403 316 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 HSDL1Q3SXM5 330 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 MPPE1Q53F39 396 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 ALG10Q5BKT4 473 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 AGAP7PQ5VUJ5 663 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 FAM205BPQ63HN1 556 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 CDHR3Q6ZTQ4 885 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 MON1BQ7L1V2 547 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 ARHGAP12Q8IWW6 846 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 SVBPQ8N300 66 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 TRAPPC12Q8WVT3 735 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 HSH2DQ96JZ2 352 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 OSMRQ99650 979 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 MYOCQ99972 504 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 MAPKAP1Q9BPZ7 522 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 ANKRD60Q9BZ19 345 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 TFB2MQ9H5Q4 396 aaKnown RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 RHCGQ9UBD6 479 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 NDOR1Q9UHB4 597 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 COPS3Q9UNS2 423 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 LRP6O75581 1613 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 YDJCA8MPS7 323 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 SLC19A2O60779 497 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 AHSA1O95433 338 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 RAB36O95755 333 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 PNPP00491 289 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 MBP02144 154 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 HMGN1P05114 100 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 ADH7P40394 386 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 MS4A2Q01362 244 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 TUSC3Q13454 348 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 GK2Q14410 553 aaPredicted RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 LARS2Q15031 903 aaKnown RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 CTXN3Q4LDR2 81 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 FAM83HQ6ZRV2 1179 aaPredicted RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 OR6Q1Q8NGQ2 317 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 RHOXF1Q8NHV9 184 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 DUSP26Q9BV47 211 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 NUSAP1Q9BXS6 441 aaKnown RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 BRD9Q9H8M2 597 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 KCNJ16Q9NPI9 418 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 GALPQ9UBC7 116 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 LOC102723532A0A0G2JNH3 316 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 TRBC2A0A5B9 178 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 OR6C6A6NF89 314 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 ACKR2O00590 384 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 TO15178 435 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 PCDH8O95206 1070 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms