RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 DOCK3Q8IZD9 2030 aa9.64□□□□□ -0.87
SCNM1-202ENST00000368905 A0A0U1RQS6 177 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 FAM149AA5PLN7 773 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 K7EQM0 130 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 DUSP11O75319 330 aaKnown RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 SIX3O95343 332 aaPredicted RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 PEPDP12955 493 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 SLC18A2Q05940 514 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 ADIGQ0VDE8 80 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 SLC1A5Q15758 541 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 NPTX1Q15818 432 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 C3orf38Q5JPI3 329 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 PEAR1Q5VY43 1037 aaPredicted RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 MFSD14CQ5VZR4 134 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 TSSK4Q6SA08 328 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 GPRIN3Q6ZVF9 776 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 CHST9Q7L1S5 443 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 LRRC8DQ7L1W4 858 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 MCATQ8IVS2 390 aaKnown RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 BBS7Q8IWZ6 715 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 CTAGE3PQ8IX95 158 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 DEFB106AQ8N104 65 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 SMG8Q8ND04 991 aaKnown RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 DTX3LQ8TDB6 740 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 TCP10LQ8TDR4 215 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 MZB1Q8WU39 189 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 KLHL29Q96CT2 875 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 LRRC46Q96FV0 321 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 PLEKHA8Q96JA3 519 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 CAPNS2Q96L46 248 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 ZNF607Q96SK3 696 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 WDR83Q9BRX9 315 aaKnown RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 CXCL16Q9H2A7 254 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 POPDC2Q9HBU9 364 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 TXNDC16Q9P2K2 825 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 CHRNA9Q9UGM1 479 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 E5RI56 91 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 COPEO14579 308 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 SEPT4O43236 478 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 GABBR2O75899 941 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 SNRPB2P08579 225 aaKnown RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 NQO2P16083 231 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 HK1P19367 917 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 CCNOP22674 350 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 POU1F1P28069 291 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 NUDT1P36639 197 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 MAGEA3P43357 314 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 PLK1P53350 603 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 AP1S2P56377 157 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 PER3P56645 1201 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 UBE2G2P60604 165 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 RPL10AP62906 217 aaKnown RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 SREBF2Q12772 1141 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 VEZF1Q14119 521 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 FLOT2Q14254 428 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 MFSD13AQ14CX5 517 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 ETFDHQ16134 617 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 RAB6CQ53S08 254 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 DCAF6Q58WW2 860 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 FUT10Q6P4F1 479 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 CRTC3Q6UUV7 619 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 NAGSQ8N159 534 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 TRAM1L1Q8N609 369 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 IL17RCQ8NAC3 791 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 OR6Q1Q8NGQ2 317 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 BRIX1Q8TDN6 353 aaKnown RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 SETD7Q8WTS6 366 aaKnown RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 MRGPRFQ96AM1 343 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 DAZAP1Q96EP5 407 aaKnown RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 EBNA1BP2Q99848 306 aaKnown RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 RAB6CQ9H0N0 254 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 MMP27Q9H306 513 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 MANSC1Q9H8J5 431 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 MMP25Q9NPA2 562 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 LRIT1Q9P2V4 623 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 TRMT6Q9UJA5 497 aaKnown RBP9.63□□□□□ -0.87
SCNM1-202ENST00000368905 PCDHGB1Q9Y5G3 927 aa9.63□□□□□ -0.87
SCNM1-202ENST00000368905 CLDN4O14493 209 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 ZIC2O95409 532 aaPredicted RBP9.62□□□□□ -0.87
SCNM1-202ENST00000368905 NQO1P15559 274 aaKnown RBP9.62□□□□□ -0.87
SCNM1-202ENST00000368905 MYF6P23409 242 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 PIK3R1P27986 724 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 OTX2P32243 289 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 GLUD2P49448 558 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 HNRNPFP52597 415 aaKnown RBP9.62□□□□□ -0.87
SCNM1-202ENST00000368905 CEBPGP53567 150 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 ACTBP60709 375 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 NCALDP61601 193 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 ST8SIA6P61647 398 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 ACTA2P62736 377 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 ACTG1P63261 375 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 ACTG2P63267 376 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 ACTC1P68032 377 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 ACTA1P68133 377 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 FAAP100Q0VG06 881 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 SPRED3Q2MJR0 410 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 SLC36A3Q495N2 470 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 LRRC66Q68CR7 880 aa9.62□□□□□ -0.87
SCNM1-202ENST00000368905 NCBP2-AS2Q69YL0 99 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms