RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 KLHL41O60662 606 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 KERAO60938 352 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 STATHP02808 62 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 SERPIND1P05546 499 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 ABHD2P08910 425 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 SNRPAP09012 282 aaKnown RBP9.34□□□□□ -0.91
CD48-202ENST00000368046 FAM153BP0C7A2 387 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 COL6A2P12110 1019 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 VARSP26640 1264 aaKnown RBP9.34□□□□□ -0.91
CD48-202ENST00000368046 HSPA7P48741 367 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 SERPINB8P50452 374 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 EMP2P54851 167 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 SNRPNP63162 240 aaKnown RBP9.34□□□□□ -0.91
CD48-202ENST00000368046 IRF9Q00978 393 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 RGS1Q08116 209 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 CHAF1BQ13112 559 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 SLC29A2Q14542 456 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 HERC3Q15034 1050 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 FAM153CQ494X1 144 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 LACTB2Q53H82 288 aaPredicted RBP9.34□□□□□ -0.91
CD48-202ENST00000368046 CPZQ66K79 652 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 KLC3Q6P597 504 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 KIRREL2Q6UWL6 708 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 TMIGD1Q6UXZ0 262 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 ASB18Q6ZVZ8 466 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 TAOK1Q7L7X3 1001 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 TMPRSS11BQ86T26 416 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 PTRH1Q86Y79 214 aaKnown RBP9.34□□□□□ -0.91
CD48-202ENST00000368046 CENPLQ8N0S6 344 aaPredicted RBP9.34□□□□□ -0.91
CD48-202ENST00000368046 KRT78Q8N1N4 520 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 OR51Q1Q8NH59 317 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 NT5CQ8TCD5 201 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 DCAKDQ8WVC6 231 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 ISL2Q96A47 359 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 MOCOSQ96EN8 888 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 GPR78Q96P69 363 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 TMEM79Q9BSE2 394 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 CRB3Q9BUF7 120 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 PITHD1Q9GZP4 211 aaPredicted RBP9.34□□□□□ -0.91
CD48-202ENST00000368046 VPS11Q9H270 941 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 SPNS1Q9H2V7 528 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 EHD1Q9H4M9 534 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 CLK4Q9HAZ1 481 aaKnown RBP9.34□□□□□ -0.91
CD48-202ENST00000368046 ANKHQ9HCJ1 492 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 C14orf105Q9NVL8 296 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 NUDT4Q9NZJ9 180 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 COPG2Q9UBF2 871 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 C3orf18Q9UK00 162 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 G3BP2Q9UN86 482 aaKnown RBP9.34□□□□□ -0.91
CD48-202ENST00000368046 TP53TG5Q9Y2B4 290 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 HEMK1Q9Y5R4 338 aaPredicted RBP9.34□□□□□ -0.91
CD48-202ENST00000368046 HS3ST3B1Q9Y662 390 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 SPTBP11277 2137 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 PCM1Q15154 2024 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 ANKDD1BA6NHY2 528 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 A6NL46 340 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 IDSB3KWA1 339 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 K7EPI3 171 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 SOCS6O14544 535 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 NDUFS4O43181 175 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 CCNT2O60583 730 aaKnown RBP9.33□□□□□ -0.92
CD48-202ENST00000368046 BMP10O95393 424 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 HEXBP07686 556 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 SERPINA6P08185 405 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 RBP1P09455 135 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 SMIM10L1P0DMW3 83 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 MTHFD2P13995 350 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 ALOX12P18054 663 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 IL1RNP18510 177 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 IL10P22301 178 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 GSTM2P28161 218 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 CASP2P42575 452 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 MAGEA12P43365 314 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 SKP1P63208 163 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 MAT1AQ00266 395 aaKnown RBP9.33□□□□□ -0.92
CD48-202ENST00000368046 REEP5Q00765 189 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 PCDH1Q08174 1060 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 KLRB1Q12918 225 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 AIMP2Q13155 320 aaKnown RBP9.33□□□□□ -0.92
CD48-202ENST00000368046 LAPTM5Q13571 262 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 DOC2AQ14183 400 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 RBBP7Q16576 425 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 HIST2H2ACQ16777 129 aaPredicted RBP9.33□□□□□ -0.92
CD48-202ENST00000368046 SYT16Q17RD7 645 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 FBXO48Q5FWF7 155 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 XKR6Q5GH73 641 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 HIST2H2AA3Q6FI13 130 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 ABHD13Q7L211 337 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 PRSS41Q7RTY9 318 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 HPS6Q86YV9 775 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 PRSS58Q8IYP2 241 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 CNPY4Q8N129 248 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 GALNT16Q8N428 558 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 AFAP1L2Q8N4X5 818 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 TEX19Q8NA77 164 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 LRRN4CLQ8ND94 238 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 FDCSPQ8NFU4 85 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 TTLQ8NG68 377 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 OR11G2Q8NGC1 345 aa9.33□□□□□ -0.92
CD48-202ENST00000368046 CREB3L4Q8TEY5 395 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms