RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 SMURF1Q9HCE7 757 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 CCDC59Q9P031 241 aaKnown RBP18.96■□□□□ 0.63
TRIM58-201ENST00000366481 MBD1Q9UIS9 605 aaPredicted RBP18.96■□□□□ 0.63
TRIM58-201ENST00000366481 SNX7Q9UNH6 387 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 DLGAP4Q9Y2H0 992 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 DHRS7Q9Y394 339 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 HSPB11Q9Y547 144 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 OR6C75A6NL08 312 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 GLUD1P00367 558 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 PTGER3P43115 390 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 TGM4P49221 684 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 TBCEQ15813 527 aaPredicted RBP18.96■□□□□ 0.63
TRIM58-201ENST00000366481 TCTN1Q2MV58 587 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 C10orf62Q5T681 223 aaPredicted RBP18.96■□□□□ 0.63
TRIM58-201ENST00000366481 ATG9BQ674R7 924 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 FAAH2Q6GMR7 532 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 KIAA1841Q6NSI8 718 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 SLC44A2Q8IWA5 706 aaPredicted RBP18.96■□□□□ 0.63
TRIM58-201ENST00000366481 COL21A1Q96P44 957 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 GFM1Q96RP9 751 aaKnown RBP18.96■□□□□ 0.63
TRIM58-201ENST00000366481 CCDC32Q9BV29 185 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 ASPNQ9BXN1 380 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 ABCB9Q9NP78 766 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 CRLS1Q9UJA2 301 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 CLEC4EQ9ULY5 219 aa18.96■□□□□ 0.63
TRIM58-201ENST00000366481 MN1Q10571 1320 aaPredicted RBP18.96■□□□□ 0.63
TRIM58-201ENST00000366481 ESR1P03372 595 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 PIK3CBP42338 1070 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 CDKN2CP42773 168 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 CASP9P55211 416 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 CCL23P55773 120 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 SMAD3P84022 425 aaKnown RBP18.95■□□□□ 0.62
TRIM58-201ENST00000366481 MAD2L1Q13257 205 aaPredicted RBP18.95■□□□□ 0.62
TRIM58-201ENST00000366481 MRPL58Q14197 206 aaKnown RBP18.95■□□□□ 0.62
TRIM58-201ENST00000366481 IRF3Q14653 427 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 BTBD16Q32M84 506 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 CCSAPQ6IQ19 270 aaPredicted RBP18.95■□□□□ 0.62
TRIM58-201ENST00000366481 ANKS3Q6ZW76 656 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 APH1BQ8WW43 257 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 DEDD2Q8WXF8 326 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 SLC7A6Q92536 515 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 PDLIM5Q96HC4 596 aaKnown RBP18.95■□□□□ 0.62
TRIM58-201ENST00000366481 SCLYQ96I15 445 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 OR5M11Q96RB7 305 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 MGLLQ99685 303 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 PSORS1C1Q9UIG5 152 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 A0A1B0GVM2 712 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 CDK1P06493 297 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 OLR1P78380 273 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 CHRNA6Q15825 494 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 TIMM50Q3ZCQ8 353 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 LAX1Q8IWV1 398 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 COQ8BQ96D53 544 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 CCDC120Q96HB5 630 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 PANX1Q96RD7 426 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 EBPLQ9BY08 206 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 MS4A12Q9NXJ0 267 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 PCDHGA6Q9Y5G7 932 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 FAM220BPB1ANY3 271 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 GFRA2O00451 464 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 SCO1O75880 301 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 SSTR4P31391 388 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 HSPA14Q0VDF9 509 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 IRF5Q13568 498 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 CDH18Q13634 790 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 QPRTQ15274 297 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 USP39Q53GS9 565 aaKnown RBP18.95■□□□□ 0.62
TRIM58-201ENST00000366481 PYDC2Q56P42 97 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 FAM109AQ8N4B1 249 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 FLCNQ8NFG4 579 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 FRMD6Q96NE9 622 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 SLC22A4Q9H015 551 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 IL26Q9NPH9 171 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 CD84Q9UIB8 345 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 RPS6KA6Q9UK32 745 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 ERVW-1Q9UQF0 538 aa18.95■□□□□ 0.62
TRIM58-201ENST00000366481 LOC105371267A0A1B0GV96 52 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 AKR7A2O43488 359 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 PQBP1O60828 265 aaKnown RBP18.94■□□□□ 0.62
TRIM58-201ENST00000366481 SNX4O95219 450 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 GALTP07902 379 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 CBLP22681 906 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 NRIP1P48552 1158 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 ZXDBP98169 803 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 ADGRF1Q5T601 910 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 ALG1LQ6GMV1 187 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 FEVQ99581 238 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 SDHCQ99643 169 aaPredicted RBP18.94■□□□□ 0.62
TRIM58-201ENST00000366481 NUDT4Q9NZJ9 180 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 PCM1Q15154 2024 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 SMLR1H3BR10 107 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 ZDHHC11BP0C7U3 371 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 SLC14A1Q13336 389 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 DDX39BQ13838 428 aaKnown RBP18.94■□□□□ 0.62
TRIM58-201ENST00000366481 OR4F3Q6IEY1 312 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 NCEH1Q6PIU2 408 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 ADAMTSL2Q86TH1 951 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 CCDC190Q86UF4 302 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 DNAJC22Q8N4W6 341 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 CASD1Q96PB1 797 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms