RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PPIL3Q9H2H8 161 aaKnown RBP13.51□□□□□ -0.25
SMC5-201ENST00000361138 MARCH4Q9P2E8 410 aaPredicted RBP13.51□□□□□ -0.25
SMC5-201ENST00000361138 N4BP2Q86UW6 1770 aaPredicted RBP13.51□□□□□ -0.25
SMC5-201ENST00000361138 PIRO00625 290 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 SYN3O14994 580 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 C6orf47O95873 294 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 TBX18O95935 607 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 ZNF806P0C7X5 589 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 KCNE1P15382 129 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 PRKACBP22694 351 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 ACVR2AP27037 513 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 AVPR1BP47901 424 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 DGKGP49619 791 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 MLLT6P55198 1093 aaPredicted RBP13.51□□□□□ -0.25
SMC5-201ENST00000361138 SNRPD2P62316 118 aaKnown RBP13.51□□□□□ -0.25
SMC5-201ENST00000361138 EMX1Q04741 257 aaPredicted RBP13.51□□□□□ -0.25
SMC5-201ENST00000361138 CYP27C1Q4G0S4 372 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 HSD17B12Q53GQ0 312 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 ARL9Q6T311 187 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 COQ8AQ8NI60 647 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 NETO1Q8TDF5 533 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 PCYT2Q99447 389 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 LGR4Q9BXB1 951 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 CFAP97Q9P2B7 532 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 ANKRD66B4E2M5 251 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 GNB5O14775 395 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 TLL1O43897 1013 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 OR1I1O60431 355 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 ITGAMP11215 1152 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 ZNF691Q5VV52 312 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 RNF130Q86XS8 419 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 KIF18BQ86Y91 864 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 TP53INP2Q8IXH6 220 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 NXPE1Q8N323 547 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 SLC38A8A6NNN8 435 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 CLCA1A8K7I4 914 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 RP2O75695 350 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 CDH11P55287 796 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 SLC3A1Q07837 685 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 PPIGQ13427 754 aaKnown RBP eCLIP13.51□□□□□ -0.252e-6■■■□□ 18.3
SMC5-201ENST00000361138 CHRNA6Q15825 494 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 AGAP7PQ5VUJ5 663 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 CCDC107Q8WV48 283 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 HYLS1Q96M11 299 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 OR1F1O43749 312 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 PRAMEF11O60813 436 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 HK1P19367 917 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 NCBP2P52298 156 aaKnown RBP eCLIP13.5□□□□□ -0.254e-7■■■□□ 17.7
SMC5-201ENST00000361138 NFE2L1Q14494 772 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 TCEA2Q15560 299 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 CEACAM20Q6UY09 585 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 DNAJA4Q8WW22 397 aaPredicted RBP13.5□□□□□ -0.25
SMC5-201ENST00000361138 PEX13Q92968 403 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 RERGQ96A58 199 aaPredicted RBP13.5□□□□□ -0.25
SMC5-201ENST00000361138 CNDP2Q96KP4 475 aaKnown RBP13.5□□□□□ -0.25
SMC5-201ENST00000361138 COMMD4Q9H0A8 199 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 RNF39Q9H2S5 420 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 PADI3Q9ULW8 664 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 PRAMEF12O95522 483 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 TGFB1P01137 390 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 ASGR1P07306 291 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 FGF4P08620 206 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 SLBPQ14493 270 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMC5-201ENST00000361138 PROX2Q3B8N5 592 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 EIPR1Q53HC9 387 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 DPY19L2P1Q6NXN4 242 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 LARP4Q71RC2 724 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMC5-201ENST00000361138 SPRED1Q7Z699 444 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 CACUL1Q86Y37 369 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 CHDHQ8NE62 594 aaPredicted RBP13.5□□□□□ -0.25
SMC5-201ENST00000361138 NDC1Q9BTX1 674 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 DPCDQ9BVM2 203 aaPredicted RBP13.5□□□□□ -0.25
SMC5-201ENST00000361138 ZNF451Q9Y4E5 1061 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 NEDD8-MDP1E9PL57 170 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 ZNF432O94892 652 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 KLK1P06870 262 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 MMP28Q9H239 520 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 FAM170BA6NMN3 283 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 ZNF26P17031 533 aaPredicted RBP13.5□□□□□ -0.25
SMC5-201ENST00000361138 KDELR2P33947 212 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 DCTP40126 519 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 AP1S2P56377 157 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 SKP1P63208 163 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 ARHGAP1Q07960 439 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 SCAPQ12770 1279 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 EIF2B5Q13144 721 aaKnown RBP13.5□□□□□ -0.25
SMC5-201ENST00000361138 B3GNT8Q7Z7M8 397 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 NATD1Q8N6N6 113 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 PPP1R14AQ96A00 147 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 ACDQ96AP0 544 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 BTBD1Q9H0C5 482 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 TMEM45AQ9NWC5 275 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 PCDHGB5Q9Y5G0 923 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 PCDHGA8Q9Y5G5 932 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 MYH11P35749 1972 aa13.5□□□□□ -0.25
SMC5-201ENST00000361138 BCKDHAP12694 445 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 CA5AP35218 305 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 PRPF38BQ5VTL8 546 aaKnown RBP13.49□□□□□ -0.25
SMC5-201ENST00000361138 SLC30A6Q6NXT4 461 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 TMEM220Q6QAJ8 160 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms