RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 DMRTA1Q5VZB9 504 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 ARHGAP11AQ6P4F7 1023 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 ACAD11Q709F0 780 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 REXO1L1PQ8IX06 675 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 SYCE1Q8N0S2 351 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 MARVELD2Q8N4S9 558 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 MYRIPQ8NFW9 859 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 FAM136AQ96C01 138 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 PCBD2Q9H0N5 130 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 BFARQ9NZS9 450 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 PAK5Q9P286 719 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 EDARQ9UNE0 448 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 DRG1Q9Y295 367 aaKnown RBP12.99□□□□□ -0.33
VPS29-201ENST00000360579 VPS9D1Q9Y2B5 631 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 SLC22A7Q9Y694 548 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 DUSP10Q9Y6W6 482 aa12.99□□□□□ -0.33
VPS29-201ENST00000360579 GTF3C1Q12789 2109 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 GRID2IPA4D2P6 1211 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 ZBTB14O43829 449 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 CDC40O60508 579 aaKnown RBP eCLIP12.98□□□□□ -0.33
VPS29-201ENST00000360579 RDH16O75452 317 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 CDC123O75794 336 aaPredicted RBP12.98□□□□□ -0.33
VPS29-201ENST00000360579 VAPBO95292 243 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 SYF2O95926 243 aaKnown RBP12.98□□□□□ -0.33
VPS29-201ENST00000360579 STATHP02808 62 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 SLC35G6P0C7Q6 338 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 DRD2P14416 443 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 TFEBP19484 476 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 GRK3P35626 688 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 NPY2RP49146 381 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 MEOX1P50221 254 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 ITGA8P53708 1063 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 MLF1P58340 268 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 SNRPNP63162 240 aaKnown RBP12.98□□□□□ -0.33
VPS29-201ENST00000360579 KCNJ11Q14654 390 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 HERC3Q15034 1050 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 OASLQ15646 514 aaKnown RBP12.98□□□□□ -0.33
VPS29-201ENST00000360579 NIPAL1Q6NVV3 410 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 ADGRD1Q6QNK2 874 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 LRRC56Q8IYG6 542 aaPredicted RBP12.98□□□□□ -0.33
VPS29-201ENST00000360579 MMP21Q8N119 569 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 CCDC89Q8N998 374 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 ZNF454Q8N9F8 522 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 C16orf52Q8NHV5 167 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 ZCCHC10Q8TBK6 192 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 ATG4AQ8WYN0 398 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 PEX11GQ96HA9 241 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 UCK2Q9BZX2 261 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 CCDC177Q9NQR7 707 aaPredicted RBP12.98□□□□□ -0.33
VPS29-201ENST00000360579 EIF2B3Q9NR50 452 aaKnown RBP12.98□□□□□ -0.33
VPS29-201ENST00000360579 LANCL2Q9NS86 450 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 KLHL42Q9P2K6 505 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 ZNF148Q9UQR1 794 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 CRYL1Q9Y2S2 319 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 NAALAD2Q9Y3Q0 740 aa12.98□□□□□ -0.33
VPS29-201ENST00000360579 EPN1Q9Y6I3 576 aaPredicted RBP12.98□□□□□ -0.33
VPS29-201ENST00000360579 HEATR5BQ9P2D3 2071 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 TCRBV7S2A1N4TA0A589 114 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 LIASO43766 372 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 HS6ST1O60243 411 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 FHP07954 510 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 ENO3P13929 434 aaPredicted RBP12.97□□□□□ -0.33
VPS29-201ENST00000360579 KLK2P20151 261 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 OGNP20774 298 aaKnown RBP12.97□□□□□ -0.33
VPS29-201ENST00000360579 NMBRP28336 390 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 SKIV2L2P42285 1042 aaKnown RBP12.97□□□□□ -0.33
VPS29-201ENST00000360579 CRADDP78560 199 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 RPS6KA1Q15418 735 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 CMPK2Q5EBM0 449 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 PAOXQ6QHF9 649 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 ASPGQ86U10 573 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 ZNF227Q86WZ6 799 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 PDSS2Q86YH6 399 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 SULF2Q8IWU5 870 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 SLC13A3Q8WWT9 602 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 ASB11Q8WXH4 323 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 TSLPQ969D9 159 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 TBC1D20Q96BZ9 403 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 TM4SF19Q96DZ7 209 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 RBCK1Q9BYM8 510 aa12.97□□□□□ -0.33
VPS29-201ENST00000360579 VPS13CQ709C8 3753 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 GFYI3L273 518 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 PEX1O43933 1283 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 KLK8O60259 260 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 MPC1LP0DKB6 136 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 FOSL1P15407 271 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 ARNTP27540 789 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 IMPA1P29218 277 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 CLCN7P51798 805 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 CAPN13Q6MZZ7 669 aaPredicted RBP12.96□□□□□ -0.33
VPS29-201ENST00000360579 SHISA5Q8N114 240 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 ARMC10Q8N2F6 343 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 KIF2BQ8N4N8 673 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 ZFP62Q8NB50 900 aaPredicted RBP12.96□□□□□ -0.33
VPS29-201ENST00000360579 KCT2Q8NC54 265 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 SEC16BQ96JE7 1060 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 MACROD1Q9BQ69 325 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 KIFC1Q9BW19 673 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 DEFB126Q9BYW3 111 aa12.96□□□□□ -0.33
VPS29-201ENST00000360579 CCM2LQ9NUG4 571 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms