RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 A8MUA0 341 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 ACOX3O15254 700 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 AK1P00568 194 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 LIN52Q52LA3 116 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 NACAE9PAV3 2078 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 A0A1W2PRU2 124 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 C2orf74A8MZ97 194 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 NPC1O15118 1278 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 RGS19P49795 217 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 ZNF33AQ06730 810 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 MYLK3Q32MK0 819 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 VASH1Q7L8A9 365 aaPredicted RBP9.4□□□□□ -0.91
CUX1-203ENST00000360264 CD63P08962 238 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 OR4Q2P0C623 313 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 HOXD8P13378 290 aaPredicted RBP9.4□□□□□ -0.91
CUX1-203ENST00000360264 ENGP17813 658 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 NMBRP28336 390 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 GDI1P31150 447 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 GPR143P51810 404 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 TPTEP56180 551 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 CEACAM20Q6UY09 585 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 RPL10LQ96L21 214 aaKnown RBP9.4□□□□□ -0.91
CUX1-203ENST00000360264 ACTR3BQ9P1U1 418 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 FZD4Q9ULV1 537 aa9.4□□□□□ -0.91
CUX1-203ENST00000360264 BTBD19C9JJ37 291 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 E7EQ34 232 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 ACOT7O00154 380 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 RAD51DO75771 328 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 JAM2P57087 298 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 RPS3AP61247 264 aaKnown RBP9.39□□□□□ -0.91
CUX1-203ENST00000360264 BBS10Q8TAM1 723 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 RIOK2Q9BVS4 552 aaKnown RBP9.39□□□□□ -0.91
CUX1-203ENST00000360264 BORCS7-ASMTA0A0B4J1R7 106 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 KCNC1P48547 511 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 KIAA1161Q6NSJ0 714 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 SLC36A4Q6YBV0 504 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 NLGN2Q8NFZ4 835 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 OR5T2Q8NGG2 359 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 KCNC2Q96PR1 638 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 TAS2R1Q9NYW7 299 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 IFT172Q9UG01 1749 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 NEURL4Q96JN8 1562 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 C8BP07358 591 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 IMPDH1P20839 514 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 IST1P53990 364 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 CDH11P55287 796 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 PLEKHG7Q6ZR37 379 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 LHFPL3Q86UP9 236 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 GLIS3Q8NEA6 775 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 OR6N1Q8NGY5 312 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 SALL3Q9BXA9 1300 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 PIAS1O75925 651 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 APBB3O95704 486 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 NFE2L1Q14494 772 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 TAS2R9Q9NYW1 312 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 GPRC5BQ9NZH0 403 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 PCNX2A6NKB5 2137 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 GNB5O14775 395 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 TYRP14679 529 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 ABHD18Q0P651 414 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 CCINQ13939 588 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 ANKRD26P1Q6NSI1 321 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 TMEM214Q6NUQ4 689 aaKnown RBP9.39□□□□□ -0.91
CUX1-203ENST00000360264 CYB5D2Q8WUJ1 264 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 SLIT3O75094 1523 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 PKDREJQ9NTG1 2253 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 PPM1BO75688 479 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 UGT1A4P22310 534 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 BRCC3P46736 316 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 GALK2Q01415 458 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 IRF5Q13568 498 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 CLEC12AQ5QGZ9 265 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 CIB1Q99828 191 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 TAC3Q9UHF0 121 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 ADAM18Q9Y3Q7 739 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 PCDHGC4Q9Y5F7 938 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 GJE1A6NN92 205 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 ARVCFO00192 962 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 CAPN5O15484 640 aaPredicted RBP9.39□□□□□ -0.91
CUX1-203ENST00000360264 NPR2P20594 1047 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 DCAF4L2Q8NA75 395 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 OR9A1PQ8NGU1 263 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 C22orf15Q8WYQ4 148 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 BCL9LQ86UU0 1499 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 FMN2Q9NZ56 1722 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 hCG_2039718K7EN88 272 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 MXD1Q05195 221 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 PSD4Q8NDX1 1056 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 FAM46DQ8NEK8 389 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 LRRC20Q8TCA0 184 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 MVB12BQ9H7P6 319 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 LRCH4O75427 683 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 BCAS2O75934 225 aaPredicted RBP9.39□□□□□ -0.91
CUX1-203ENST00000360264 CHRNA1P02708 482 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 LPLP06858 475 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 UNGP13051 313 aaPredicted RBP9.39□□□□□ -0.91
CUX1-203ENST00000360264 DPP6P42658 865 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 GRK1Q15835 563 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 CDKL4Q5MAI5 379 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 NDRG1Q92597 394 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms