RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 RPLP0P05388 317 aaKnown RBP20.9■□□□□ 0.94
HOXA4-201ENST00000360046 G6PDP11413 515 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 TGM1P22735 817 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 ATP4BP51164 291 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 CFHR1Q03591 330 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 SNAP47Q5SQN1 464 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 FAM91A1Q658Y4 838 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 RNF44Q7L0R7 432 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 ASPGQ86U10 573 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 LIX1Q8N485 282 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 SLC13A3Q8WWT9 602 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 RERGQ96A58 199 aaPredicted RBP20.9■□□□□ 0.94
HOXA4-201ENST00000360046 OR2A5Q96R48 311 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 CENPKQ9BS16 269 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 EBPLQ9BY08 206 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 TMEM9Q9P0T7 183 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 RUVBL1Q9Y265 456 aaKnown RBP20.9■□□□□ 0.94
HOXA4-201ENST00000360046 DLGAP4Q9Y2H0 992 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 GPR45Q9Y5Y3 372 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 MN1Q10571 1320 aaPredicted RBP20.89■□□□□ 0.93
HOXA4-201ENST00000360046 IGHV5-51A0A0C4DH38 117 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 CAPN14A8MX76 684 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 PSMD12O00232 456 aaPredicted RBP20.89■□□□□ 0.93
HOXA4-201ENST00000360046 PIK3R1P27986 724 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 RELAQ04206 551 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 DEPDC1Q5TB30 811 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 FRMPD2BQ6IN97 320 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 NOXRED1Q6NXP6 359 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 WDR74Q6RFH5 385 aaPredicted RBP20.89■□□□□ 0.93
HOXA4-201ENST00000360046 CYP20A1Q6UW02 462 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 VN1R4Q7Z5H5 301 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 NAXDQ8IW45 347 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 CHTF18Q8WVB6 975 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 THAP11Q96EK4 314 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 TCTN2Q96GX1 697 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 METTL2AQ96IZ6 378 aaKnown RBP20.89■□□□□ 0.93
HOXA4-201ENST00000360046 PHOX2BQ99453 314 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 NUDT22Q9BRQ3 303 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 FAM60AQ9NP50 221 aa20.89■□□□□ 0.93
HOXA4-201ENST00000360046 ATXN7L1Q9ULK2 861 aaPredicted RBP20.89■□□□□ 0.93
HOXA4-201ENST00000360046 ASCC3Q8N3C0 2202 aaKnown RBP20.89■□□□□ 0.93
HOXA4-201ENST00000360046 SLC35G6P0C7Q6 338 aa20.88■□□□□ 0.93
HOXA4-201ENST00000360046 BCKDHAP12694 445 aa20.88■□□□□ 0.93
HOXA4-201ENST00000360046 CKMT2P17540 419 aa20.88■□□□□ 0.93
HOXA4-201ENST00000360046 HNRNPH1P31943 449 aaKnown RBP20.88■□□□□ 0.93
HOXA4-201ENST00000360046 MLLT3P42568 568 aaPredicted RBP20.88■□□□□ 0.93
HOXA4-201ENST00000360046 CCL7P80098 99 aa20.88■□□□□ 0.93
HOXA4-201ENST00000360046 DEFB110Q30KQ9 67 aa20.88■□□□□ 0.93
HOXA4-201ENST00000360046 PAOXQ6QHF9 649 aa20.88■□□□□ 0.93
HOXA4-201ENST00000360046 COMMD6Q7Z4G1 85 aa20.88■□□□□ 0.93
HOXA4-201ENST00000360046 BRINP2Q9C0B6 783 aa20.88■□□□□ 0.93
HOXA4-201ENST00000360046 REXO4Q9GZR2 422 aaKnown RBP20.88■□□□□ 0.93
HOXA4-201ENST00000360046 SDR39U1Q9NRG7 319 aaPredicted RBP20.88■□□□□ 0.93
HOXA4-201ENST00000360046 ARL8BQ9NVJ2 186 aa20.88■□□□□ 0.93
HOXA4-201ENST00000360046 ASIC5Q9NY37 505 aa20.88■□□□□ 0.93
HOXA4-201ENST00000360046 AHSPQ9NZD4 102 aa20.88■□□□□ 0.93
HOXA4-201ENST00000360046 LOC105369274A0A096LPK9 316 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 LOC102723532A0A0G2JNH3 316 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 LRIT2A6NDA9 550 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 SLC22A2O15244 555 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 MAP3K7O43318 606 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 KIAA0754O94854 1291 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 SEMA3DO95025 777 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 CBX6O95503 412 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 ZBTB11O95625 1053 aaPredicted RBP20.87■□□□□ 0.93
HOXA4-201ENST00000360046 C9P02748 559 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 EIF2S1P05198 315 aaKnown RBP20.87■□□□□ 0.93
HOXA4-201ENST00000360046 ADSLP30566 484 aaPredicted RBP20.87■□□□□ 0.93
HOXA4-201ENST00000360046 IRX1P78414 480 aaPredicted RBP20.87■□□□□ 0.93
HOXA4-201ENST00000360046 RGS1Q08116 209 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 PTGR1Q14914 329 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 AGKQ53H12 422 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 TOR1AIP1Q5JTV8 583 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 PARP9Q8IXQ6 854 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 OR4N4Q8N0Y3 316 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 METTL4Q8N3J2 472 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 OR9I1Q8NGQ6 314 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 SLC45A3Q96JT2 553 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 LRRN3Q9H3W5 708 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 CCDC167Q9P0B6 97 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 GNG14A0A1W2PPG7 69 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 PROB1E7EW31 1015 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 H0YGG7 62 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 PLPP1O14494 284 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 PCDH7O60245 1069 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 FOXD2O60548 495 aaPredicted RBP20.87■□□□□ 0.93
HOXA4-201ENST00000360046 CPNE6O95741 557 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 GPX3P22352 226 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 ARL4DP49703 201 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 SEPHS1P49903 392 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 ARF3P61204 181 aaPredicted RBP20.87■□□□□ 0.93
HOXA4-201ENST00000360046 KRT72Q14CN4 511 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 PDCD4Q53EL6 469 aaKnown RBP20.87■□□□□ 0.93
HOXA4-201ENST00000360046 TMEM35AQ53FP2 167 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 ZC3H12BQ5HYM0 836 aaKnown RBP20.87■□□□□ 0.93
HOXA4-201ENST00000360046 CARFQ8N187 725 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 CLHC1Q8NHS4 586 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 WDR48Q8TAF3 677 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 RGMAQ96B86 450 aa20.87■□□□□ 0.93
HOXA4-201ENST00000360046 SORBS1Q9BX66 1292 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms