RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ABRAXAS2Q15018 415 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 PRTGQ2VWP7 1150 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 TUBB8Q3ZCM7 444 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 SGO1Q5FBB7 561 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 TCTE1Q5JU00 501 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 FAM47EQ6ZV65 393 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 RAB11FIP2Q7L804 512 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 MTERF4Q7Z6M4 381 aaKnown RBP11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 GALNT15Q8N3T1 639 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 RNF175Q8N4F7 328 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 CAMKVQ8NCB2 501 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 OR8K5Q8NH50 307 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 OR1L3Q8NH93 324 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 TWIST2Q8WVJ9 160 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 OR6C1Q96RD1 312 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 MTERF1Q99551 399 aaKnown RBP11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 MS4A8Q9BY19 250 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 SLC6A16Q9GZN6 736 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 SPRTNQ9H040 489 aaPredicted RBP11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 BRF2Q9HAW0 419 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 DMRT3Q9NQL9 472 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 VTI1BQ9UEU0 232 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 SERTAD3Q9UJW9 196 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 ZMIZ1Q9ULJ6 1067 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 FIS1Q9Y3D6 152 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 LOXL2Q9Y4K0 774 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 SPTBP11277 2137 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 FITM1A5D6W6 292 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 LRIT2A6NDA9 550 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 TMEM150CB9EJG8 249 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 P2RX6O15547 441 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 TGFB1P01137 390 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 EIF2S1P05198 315 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 FGF5P12034 268 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 CCL4P13236 92 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 PTX3P26022 381 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 LSP1P33241 339 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 EMP3P54852 163 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 RPS13P62277 151 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 CYP4F2P78329 520 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 PHEXP78562 749 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 TUBB3Q13509 450 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 DDX39BQ13838 428 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 ADPRMQ3LIE5 342 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 DEPDC1Q5TB30 811 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 SCIMPQ6UWF3 145 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 WDR75Q8IWA0 830 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 ARHGEF39Q8N4T4 335 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 AFAP1L2Q8N4X5 818 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 CSNK1A1LQ8N752 337 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 GBP7Q8N8V2 638 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 N4BP2L2Q92802 583 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 GATA6Q92908 595 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 CMTM7Q96FZ5 175 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 CCT7Q99832 543 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 MACROD1Q9BQ69 325 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 AICDAQ9GZX7 198 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 FANCEQ9HB96 536 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 ADAM21Q9UKJ8 722 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 RARRES3Q9UL19 164 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 CCL27Q9Y4X3 112 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 PTPRBP23467 1997 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 A0A1W2PNU3 283 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 NPIPB8E9PQR5 432 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 AGRPO00253 132 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 SLC28A1O00337 649 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 ZNF195O14628 629 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 HDAC3O15379 428 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 ZSCAN9O15535 394 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 NDUFS4O43181 175 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 OR2B3O76000 313 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 TGDSO95455 350 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 STATHP02808 62 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 SERPIND1P05546 499 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 VIMP08670 466 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 SLC35G6P0C7Q6 338 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 KITP10721 976 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 GCGRP47871 477 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 ITGA1P56199 1179 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 GNGT1P63211 74 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 FOXM1Q08050 763 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 RGS1Q08116 209 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 CSTF3Q12996 717 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 CUL3Q13618 768 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 GRM7Q14831 915 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 HKDC1Q2TB90 917 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 TLDC1Q6P9B6 456 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 CYB5D1Q6P9G0 228 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 Q6ZSR9 355 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 LRRC34Q8IZ02 419 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 ZNF655Q8N720 491 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 KCT2Q8NC54 265 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 WDR36Q8NI36 951 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 CHMP6Q96FZ7 201 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 HBEGFQ99075 208 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 SERPINI1Q99574 410 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 NLNQ9BYT8 704 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 PFDN4Q9NQP4 134 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 STARD5Q9NSY2 213 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 MARCOQ9UEW3 520 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms