RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 VILLO15195 856 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 RNF13O43567 381 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 NARSO43776 548 aaKnown RBP17.83■□□□□ 0.44
SHANK1-202ENST00000359082 COL9A3Q14050 684 aaPredicted RBP17.83■□□□□ 0.44
SHANK1-202ENST00000359082 PDSS1Q5T2R2 415 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 FANK1Q8TC84 345 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 GNG2P59768 71 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 RAB8AP61006 207 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 ID2Q02363 134 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 NADK2Q4G0N4 442 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 LRRC66Q68CR7 880 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 ZSCAN4Q8NAM6 433 aaPredicted RBP17.83■□□□□ 0.44
SHANK1-202ENST00000359082 A0A0G2JLL6 359 aaPredicted RBP17.83■□□□□ 0.44
SHANK1-202ENST00000359082 SMCO3A2RU48 225 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 CHRNA1P02708 482 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 STOMP27105 288 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 PRRT2Q7Z6L0 340 aaPredicted RBP17.83■□□□□ 0.44
SHANK1-202ENST00000359082 SEC14L1Q92503 715 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 ALPK1Q96QP1 1244 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 KCNA7Q96RP8 456 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 BRF2Q9HAW0 419 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 UQCRC1P31930 480 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 ADGRF1Q5T601 910 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 POGLUT1Q8NBL1 392 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 STOML3Q8TAV4 291 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 TMEM74Q96NL1 305 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 FBXL12Q9NXK8 326 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 DISC1C4P0D8 188 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 CFHP08603 1231 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 MRPL3P09001 348 aaKnown RBP17.82■□□□□ 0.44
SHANK1-202ENST00000359082 SLC44A3Q8N4M1 653 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 PKP2Q99959 881 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 ADAMTS3O15072 1205 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 GHRHRQ02643 423 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 ST3GAL3Q11203 375 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 ZNF517Q6ZMY9 492 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-202ENST00000359082 FUBP3Q96I24 572 aaKnown RBP eCLIP17.82■□□□□ 0.44
SHANK1-202ENST00000359082 PCDHGB2Q9Y5G2 931 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 SLIT3O75094 1523 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 POP7O75817 140 aaKnown RBP17.82■□□□□ 0.44
SHANK1-202ENST00000359082 PRKACGP22612 351 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 RAB15P59190 212 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 RPS3AP61247 264 aaKnown RBP17.82■□□□□ 0.44
SHANK1-202ENST00000359082 NCEH1Q6PIU2 408 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 SLC36A4Q6YBV0 504 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 RNF130Q86XS8 419 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 ZBTB8BQ8NAP8 495 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-202ENST00000359082 ZNF431Q8TF32 576 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-202ENST00000359082 TAS2R1Q9NYW7 299 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 FETUBQ9UGM5 382 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 FESP07332 822 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 PSMA6P60900 246 aaKnown RBP17.82■□□□□ 0.44
SHANK1-202ENST00000359082 MLLT1Q03111 559 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-202ENST00000359082 LAPTM4AQ15012 233 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 CYP1B1Q16678 543 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 UAP1L1Q3KQV9 507 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 TMCO2Q7Z6W1 182 aaPredicted RBP17.82■□□□□ 0.44
SHANK1-202ENST00000359082 CD180Q99467 661 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 C3P01024 1663 aa17.82■□□□□ 0.44
SHANK1-202ENST00000359082 A0A1B0GVI7 797 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 PIM1P11309 404 aaPredicted RBP17.81■□□□□ 0.44
SHANK1-202ENST00000359082 SYN1P17600 705 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 ZDHHC24Q6UX98 284 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 GKN2Q86XP6 184 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 OR6N1Q8NGY5 312 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 SMG9Q9H0W8 520 aaKnown RBP17.81■□□□□ 0.44
SHANK1-202ENST00000359082 OR51B5Q9H339 312 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 CD320Q9NPF0 282 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 ZNF226Q9NYT6 803 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 A0A0G2JPF8 293 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 HNRNPCL3B7ZW38 293 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 HNRNPCL4P0DMR1 293 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 G6PDP11413 515 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 GGT5P36269 586 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 KCNQ1P51787 676 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 MEP1AQ16819 746 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 SUSD1Q6UWL2 747 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 NATD1Q8N6N6 113 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 SLC5A11Q8WWX8 675 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 ACDQ96AP0 544 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 BEX2Q9BXY8 128 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 C11orf49Q9H6J7 331 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 BEX1Q9HBH7 125 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 DNAJC27Q9NZQ0 273 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 PCDHB14Q9Y5E9 798 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.81■□□□□ 0.44
SHANK1-202ENST00000359082 ANKDD1AQ495B1 522 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 C12orf40Q86WS4 652 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 ERI1Q8IV48 349 aaKnown RBP17.81■□□□□ 0.44
SHANK1-202ENST00000359082 HSPA12AO43301 675 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 CDH11P55287 796 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 PON3Q15166 354 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 DCAF12L1Q5VU92 463 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 BRAT1Q6PJG6 821 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 SLC9B2Q86UD5 537 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 SLC15A3Q8IY34 581 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 OR8K3Q8NH51 312 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 MAPKAP1Q9BPZ7 522 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 KCTD3Q9Y597 815 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 HEXBP07686 556 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms