RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PLEKHM3Q6ZWE6 761 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 SLC43A3Q8NBI5 491 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 OR8H1Q8NGG4 311 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 WFDC5Q8TCV5 224 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 IRF7Q92985 503 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 FUNDC2Q9BWH2 189 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 LHPPQ9H008 270 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 COQ3Q9NZJ6 369 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 ACSL6Q9UKU0 697 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 CARNS1A5YM72 827 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 SLC1A7O00341 560 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 OR7A17O14581 309 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 PLOD3O60568 738 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 INMTO95050 263 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 CSF2RAP15509 400 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 ZNF30P17039 623 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 TNFRSF1BP20333 461 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 GNG2P59768 71 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 TGM3Q08188 693 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 NFATC3Q12968 1075 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 RAPSNQ13702 412 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 DCST1Q5T197 706 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 KIAA1614Q5VZ46 1190 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 SBSNQ6UWP8 590 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 CYP4Z2PQ8N1L4 340 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 WBP2Q969T9 261 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 RDH12Q96NR8 316 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 DCSTAMPQ9H295 470 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 SP140LQ9H930 580 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 ATP6V1HQ9UI12 483 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 SESN1Q9Y6P5 492 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 TTC34A8MYJ7 566 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 FXYD1O00168 92 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 PDE9AO76083 593 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 F5P12259 2224 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 SDC1P18827 310 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 PAICSP22234 425 aaKnown RBP11.84□□□□□ -0.51
COL20A1-201ENST00000358894 SPIN4Q56A73 249 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 PLEKHS1Q5SXH7 462 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 IER5LQ5T953 404 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 CXorf57Q6NSI4 855 aaKnown RBP11.84□□□□□ -0.51
COL20A1-201ENST00000358894 GRASPQ7Z6J2 395 aaPredicted RBP11.84□□□□□ -0.51
COL20A1-201ENST00000358894 EPHX4Q8IUS5 362 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 LINC01599Q8WXQ3 324 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 Q96MT0 163 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 YIPF4Q9BSR8 244 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 TMEM98Q9Y2Y6 226 aa11.84□□□□□ -0.51
COL20A1-201ENST00000358894 E7EQ34 232 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 SLC22A1O15245 554 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 NOS1APO75052 506 aaPredicted RBP11.83□□□□□ -0.52
COL20A1-201ENST00000358894 ATE1O95260 518 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 SLC16A8O95907 504 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 VIPP01282 170 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 MT-ND2P03891 347 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 OLR1P78380 273 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 SLC14A2Q15849 920 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 TMEM236Q5W0B7 351 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 FAM124AQ86V42 546 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 COL21A1Q96P44 957 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 BEX2Q9BXY8 128 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 ZNF224Q9NZL3 707 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 TAC3Q9UHF0 121 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 TRBC2A0A5B9 178 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 TGM5O43548 720 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 CPNE3O75131 537 aaKnown RBP11.83□□□□□ -0.52
COL20A1-201ENST00000358894 PSIP1O75475 530 aaKnown RBP11.83□□□□□ -0.52
COL20A1-201ENST00000358894 ANXA8P13928 327 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 JUPP14923 745 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 CST5P28325 142 aaPredicted RBP11.83□□□□□ -0.52
COL20A1-201ENST00000358894 NR4A2P43354 598 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 BMXP51813 675 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 HEPACAMQ14CZ8 416 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 PRAMEF14Q5SWL7 426 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 PRAMEF13Q5VWM6 474 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 AMZ2Q86W34 360 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 RNF130Q86XS8 419 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 USP7Q93009 1102 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 NUS1Q96E22 293 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 SIPA1Q96FS4 1042 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 IL17FQ96PD4 163 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 BRINP2Q9C0B6 783 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 LINC00597Q9H2U6 94 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 ARID2Q68CP9 1835 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 SOX14O95416 240 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 NOS3P29474 1203 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 RPP38P78345 283 aaKnown RBP11.83□□□□□ -0.52
COL20A1-201ENST00000358894 RAB33AQ14088 237 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 UAP1L1Q3KQV9 507 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 MACC1Q6ZN28 852 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 RAB8BQ92930 207 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 GLYATL1Q969I3 302 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 C1GALT1C1Q96EU7 318 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 ZNF583Q96ND8 569 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 TEFMQ96QE5 360 aaKnown RBP11.83□□□□□ -0.52
COL20A1-201ENST00000358894 PKMYT1Q99640 499 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 CENPOQ9BU64 300 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 ZNF717Q9BY31 904 aaPredicted RBP11.83□□□□□ -0.52
COL20A1-201ENST00000358894 NEK6Q9HC98 313 aa11.83□□□□□ -0.52
COL20A1-201ENST00000358894 ZNF334Q9HCZ1 680 aaPredicted RBP11.83□□□□□ -0.52
COL20A1-201ENST00000358894 UCKL1Q9NWZ5 548 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms