RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PRRT1Q99946 306 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ASAH2Q9NR71 780 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 FLRT2O43155 660 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 OR1I1O60431 355 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SCGB2A1O75556 95 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 GADD45GO95257 159 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 TPT1P13693 172 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 GALNT2Q10471 571 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 TIGD3Q6B0B8 471 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 TCEAL6Q6IPX3 200 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SLC30A10Q6XR72 485 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 LINGO2Q7L985 606 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ACSF2Q96CM8 615 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 RGCCQ9H4X1 137 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 PAGE1O75459 146 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 AKR1A1P14550 325 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SSBP1Q04837 148 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 GRSF1Q12849 480 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 GPAT3Q53EU6 434 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 C6orf183Q5T699 404 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ADAMTS18Q8TE60 1221 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 PGAP3Q96FM1 320 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SGK2Q9HBY8 427 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 PCDHA2Q9Y5H9 948 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 FAM230AA0A1W2PPH8 454 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CD79BP40259 229 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CDNFQ49AH0 187 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CCDC71Q8IV32 467 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 CNN2Q99439 309 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 MROQ9BYG7 248 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 A0A1W2PPM1 405 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ATP6V1G2-DDX39BF2Z307 99 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 ALDOAP04075 364 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 GTF2F2P13984 249 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 MAP2K4P45985 399 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SCARB2Q14108 478 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 AWAT2Q6E213 333 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 UGT2A3Q6UWM9 527 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 RBM18Q96H35 190 aaKnown RBP6.38□□□□□ -1.39
VPS13B-202ENST00000357162 HS6ST2Q96MM7 605 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SLC35A5Q9BS91 424 aa6.38□□□□□ -1.39
VPS13B-202ENST00000357162 SLX4Q8IY92 1834 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 DLX3O60479 287 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ALPPP05187 535 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 MSR1P21757 451 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ADORA2AP29274 412 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 S100A7P31151 101 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 PRKXP51817 358 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 SSTP61278 116 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 MPP7Q5T2T1 576 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 IQCF2Q8IXL9 164 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 CXorf40AQ8TE69 158 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ART5Q96L15 291 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ANKMY1Q9P2S6 941 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF69Q9UC07 566 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 KDM3BQ7LBC6 1761 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 F8P00451 2351 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF536O15090 1300 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ACOT7O00154 380 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 GRM6O15303 877 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 SLC25A14O95258 325 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-202ENST00000357162 PFKLP17858 780 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 LHCGRP22888 699 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 PLA2G16P53816 162 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF763Q0D2J5 394 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 VEZF1Q14119 521 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 TOR1AIP1Q5JTV8 583 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 WSCD1Q658N2 575 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 FIP1L1Q6UN15 594 aaKnown RBP6.37□□□□□ -1.39
VPS13B-202ENST00000357162 TMEM135Q86UB9 458 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 PAQR7Q86WK9 346 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 CRYBG2Q8N1P7 616 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 FTMTQ8N4E7 242 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ULBP1Q9BZM6 244 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ATRNL1Q5VV63 1379 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 RGS9O75916 674 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-202ENST00000357162 SEC14L2O76054 403 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 MT-CO1P00395 513 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 FGF4P08620 206 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 CHRNB2P17787 502 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 GLP1RP43220 463 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 GBE1Q04446 702 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 CTBP1Q13363 440 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 APOBEC3HQ6NTF7 200 aaKnown RBP6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF433Q8N7K0 673 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-202ENST00000357162 GPR21Q99679 349 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 UQCC2Q9BRT2 126 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF408Q9H9D4 720 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 CASC3O15234 703 aaKnown RBP6.37□□□□□ -1.39
VPS13B-202ENST00000357162 CSN2P05814 226 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 MC4RP32245 332 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 OR1G1P47890 313 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 FCGRTP55899 365 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 LIPJQ5W064 366 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 PET117Q6UWS5 81 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 SYNPOQ8N3V7 929 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 SHKBP1Q8TBC3 707 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 ADAMTS16Q8TE57 1224 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 BMFQ96LC9 184 aa6.37□□□□□ -1.39
VPS13B-202ENST00000357162 CUEDC1Q9NWM3 386 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms