RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 UQCRC2P22695 453 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 BDKRB1P46663 353 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 CDH11P55287 796 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 ACTC1P68032 377 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 ACTA1P68133 377 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 E2F1Q01094 437 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 POU4F2Q12837 409 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 MAB21L1Q13394 359 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 SOWAHAQ2M3V2 549 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 ARL9Q6T311 187 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 NRROSQ86YC3 692 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 CHCHD4Q8N4Q1 142 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 DCAF4L2Q8NA75 395 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PSD4Q8NDX1 1056 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 DBF4BQ8NFT6 615 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 SHKBP1Q8TBC3 707 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 FANK1Q8TC84 345 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PHOSPHO1Q8TCT1 267 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 RAB7BQ96AH8 199 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 LPIN3Q9BQK8 851 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 AKTIPQ9H8T0 292 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 TLR9Q9NR96 1032 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 TMLHEQ9NVH6 421 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 DMAC2Q9NW81 257 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 FBXL12Q9NXK8 326 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PCDHB14Q9Y5E9 798 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PPLO60437 1756 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 LOC100130705A0A1B0GUX0 176 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 TCRBV7S2A1N4TA0A589 114 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 FAM159BA6NKW6 160 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 OR5K4A6NMS3 321 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 E2F3O00716 465 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 INPPL1O15357 1258 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 RAD51DO75771 328 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 POP7O75817 140 aaKnown RBP6.27□□□□□ -1.41
UPF2-201ENST00000356352 ATG12O94817 140 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 ITGB1P05556 798 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 SLC15A1P46059 708 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 SOX9P48436 509 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PER3P56645 1201 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PRKCZQ05513 592 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 FBXO48Q5FWF7 155 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 OR4F3Q6IEY1 312 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 C22orf39Q6P5X5 142 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 CEACAM20Q6UY09 585 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 LYSMD3Q7Z3D4 306 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 NAT8LQ8N9F0 302 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 DENND6BQ8NEG7 585 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 TFGQ92734 400 aaPredicted RBP6.27□□□□□ -1.41
UPF2-201ENST00000356352 FAM84AQ96KN4 292 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 RDH12Q96NR8 316 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 C1orf21Q9H246 121 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 TMEM248Q9NWD8 314 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 MALT1Q9UDY8 824 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 SLC7A11Q9UPY5 501 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PCDHAC2Q9Y5I4 1007 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 BORCS7-ASMTA0A0B4J1R7 106 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 J3QLW9 94 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 KLF11O14901 512 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 NIPSNAP2O75323 286 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 HOXB2P14652 356 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 ZNF19P17023 458 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 MAGEA11P43364 429 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 TMBIM6P55061 237 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 POU6F2P78424 691 aaPredicted RBP6.27□□□□□ -1.41
UPF2-201ENST00000356352 IRF9Q00978 393 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 EMX2Q04743 252 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 KCTD19Q17RG1 926 aaPredicted RBP6.27□□□□□ -1.41
UPF2-201ENST00000356352 VMACQ2NL98 169 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 ASTE1Q2TB18 679 aaPredicted RBP6.27□□□□□ -1.41
UPF2-201ENST00000356352 FAM214AQ32MH5 1076 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 OGFRL1Q5TC84 451 aaPredicted RBP6.27□□□□□ -1.41
UPF2-201ENST00000356352 OGFOD2Q6N063 350 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PLEKHG7Q6ZR37 379 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PIGWQ7Z7B1 504 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 ZDHHC14Q8IZN3 488 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 POF1BQ8WVV4 589 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 C10orf82Q8WW14 230 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 TMBIM1Q969X1 311 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 ALPK1Q96QP1 1244 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 KATNBL1Q9H079 304 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 KCNH6Q9H252 994 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 DCSTAMPQ9H295 470 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 EBF3Q9H4W6 596 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 TREM1Q9NP99 234 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 TAS2R1Q9NYW7 299 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 ACTR3BQ9P1U1 418 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PTBP2Q9UKA9 531 aaKnown RBP6.27□□□□□ -1.41
UPF2-201ENST00000356352 NOP16Q9Y3C1 178 aaKnown RBP6.27□□□□□ -1.41
UPF2-201ENST00000356352 FER1L4A9Z1Z3 1794 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 KIDINS220Q9ULH0 1771 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 ZNF541Q9H0D2 1346 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 C9JVG2 144 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 LRRN3E7EW58 273 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 RPP14O95059 124 aaKnown RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 ERCC1P07992 297 aaPredicted RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 UGT1A1P22309 533 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 DPP6P42658 865 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 CHRNA4P43681 627 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 GDF10P55107 478 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms