RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 BARD1Q99728 777 aaKnown RBP21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 DOHHQ9BU89 302 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 DMRT3Q9NQL9 472 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 SCN3BQ9NY72 215 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 PADI2Q9Y2J8 665 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 TSC22D4Q9Y3Q8 395 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 GMPPBQ9Y5P6 360 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 PRRC2BQ5JSZ5 2229 aaKnown RBP21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 PIPSLA2A3N6 862 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 PI15O43692 258 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 PAPLNO95428 1278 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 PIK3CBP42338 1070 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 ENTPD1P49961 510 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 SIM2Q14190 667 aaPredicted RBP21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 ELOAQ14241 798 aaKnown RBP21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 ELAVL3Q14576 367 aaKnown RBP21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 COMMD6Q7Z4G1 85 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 SPRED2Q7Z698 418 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 TTC29Q8NA56 475 aaPredicted RBP21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 OR2L2Q8NH16 312 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 SGCDQ92629 289 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 ZNF707Q96C28 371 aaPredicted RBP21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 C7orf34Q96L11 122 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 KIF17Q9P2E2 1029 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 PCDHGB3Q9Y5G1 929 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 MRPS14O60783 128 aaKnown RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 POP7O75817 140 aaKnown RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 BCL10O95999 233 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 C6P13671 934 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 ADRB3P13945 408 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 ZNF8P17098 575 aaPredicted RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 EFNA1P20827 205 aaPredicted RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 CLK3P49761 638 aaKnown RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 IL1RL1Q01638 556 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 RBBP4Q09028 425 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 EIF4HQ15056 248 aaKnown RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 ZNF829Q3KNS6 432 aaPredicted RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 TCEAL5Q5H9L2 206 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 GALNT10Q86SR1 603 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 LRRC56Q8IYG6 542 aaPredicted RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 NAGSQ8N159 534 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 ATG16L2Q8NAA4 619 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 TBC1D15Q8TC07 691 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 MTERF3Q96E29 417 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 CCDC177Q9NQR7 707 aaPredicted RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 KRT84Q9NSB2 600 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 THUMPD1Q9NXG2 353 aaKnown RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 DEC1Q9P2X7 70 aa21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 WARS2Q9UGM6 360 aaKnown RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 NDRG4Q9ULP0 352 aaKnown RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 EXO1Q9UQ84 846 aaKnown RBP21.39■■□□□ 1.01
NKX2-1-201ENST00000354822 PRRT4C9JH25 899 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 K7ESM1 405 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 DIRAS1O95057 198 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 NFATC1O95644 943 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 NTRK1P04629 796 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 RB1P06400 928 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 PCMT1P22061 227 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 SELENOWP63302 87 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 KCNJ10P78508 379 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 TSTA3Q13630 321 aaPredicted RBP21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 MOGQ16653 247 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 TMEM52BQ4KMG9 183 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 IQCCQ4KMZ1 466 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 FAHD1Q6P587 224 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 UNC5DQ6UXZ4 953 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 TRIM74Q86UV6 250 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 FAM81AQ8TBF8 368 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 NXPE3Q969Y0 559 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 DYRK4Q9NR20 520 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 NUDT7P0C024 238 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 ACADLP28330 430 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 GAB1Q13480 694 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 PDE7AQ13946 482 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 KIAA1614Q5VZ46 1190 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 ARMCX6Q7L4S7 300 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 CNIH3Q8TBE1 160 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 CCDC90BQ9GZT6 254 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 DUSP21Q9H596 190 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 MYNNQ9NPC7 610 aa21.38■■□□□ 1.01
NKX2-1-201ENST00000354822 PDE4DIPQ5VU43 2346 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 A0A0J9YVX5 310 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 ZNF99A8MXY4 864 aaPredicted RBP21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 MMP20O60882 483 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 GPR37L1O60883 481 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 FURINP09958 794 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 LBX1P52954 281 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 METAP1P53582 386 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 LAPTM4AQ15012 233 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 ZC3H7AQ8IWR0 971 aaKnown RBP21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 METTL4Q8N3J2 472 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 OR52N2Q8NGI0 321 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 BORCS5Q969J3 196 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 PPCDCQ96CD2 204 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 BCL7BQ9BQE9 202 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 RAD21L1Q9H4I0 556 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 SH3PXD2BA1X283 911 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 TGFB1P01137 390 aa21.37■■□□□ 1.01
NKX2-1-201ENST00000354822 ZNF182P17025 639 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms